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. 2019 Mar 5;29(3):707–718.e8. doi: 10.1016/j.cmet.2018.12.016
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

GDF15 (G-5) Santa Cruz Cat# sc-377195
GADD 153 (B-3) Santa Cruz Cat# sc-7351; RRID: AB_627411
Phospho S51 EIF2a Epitomics/Abcam Cat# ab32157; RRID: AB_732117
ATF4 Dr David Ron (CIMR) (Harding et al., 2000a)
Calnexin Abcam Cat# ab75801; RRID: AB_1310022
Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Technologies Cat# 7074; RRID: AB_2099233
Anti-mouse IgG, HRP-linked Antibody Cell Signaling Technologies Cat# 7076; RRID: AB_330924

Biological Samples

C57BL/6J mice tissues Charles River JAX C57BL/6J; RRID: IMSR_JAX:000664
C57BL/6J mice tissues In house (University of Cambridge) N/A; RRID: IMSR_JAX:000664
Human samples (Blood) Various See Method Details for details

Chemicals, Peptides, and Recombinant Proteins

Recombinant Human GDF15 Peprotech Cat# 120-28
Lithium Chloride Sigma Cat# LX0331
Tunicamycin Sigma Cat# T7765
Thapsigargin Sigma Cat# T9033
Cobalt(II) chloride hexahydrate Sigma Cat# C8661
L-Histidinol dihydrochloride Sigma Cat# H6647
ISRIB Sigma Cat# SML0843
PERKi - GSK2606414 Calbiochem Cat# 516535
TRI Reagent (Triazol) Sigma Cat# T9424
Chloroform Honeywell Cat# C2432
Ethanol, puriss. p.a., absolute, ≥ 99.8% (GC) Sigma Cat# 32221-M
DMEM Sigma Cat# D6546
D-PBS Sigma Cat# D8537
Hanks’ Balanced Salt Solution Sigma Cat# H9269
L-Glutamine Sigma Cat# G7513
Penicillin-Streptomycin Sigma Cat# P0781
MEM Non-essential Amino Acid Sigma Cat# M7145
Sodium pyruvate Sigma Cat# S8636
2-Mercaptoethanol GIBCO Cat# 31350-010
FBS GIBCO Cat# 10270-106
FetalClone II Serum Hyclone Cat# SH30066.03
Sybr Green MasterMix Applied Biosystems Cat# 4309155
Taqman MasterMix Applied Biosystems Cat# 4304437
cOmplete, Mini Protease Inhibitor Cocktail Sigma Cat# 11836153001
PhosSTOP Sigma Cat# 4906845001
Random primers Promega Cat# C1181
RNasin Plus Ribonuclease inhibitor Promega Cat# N2611
MMLV Reverse Transcriptase Promega Cat# M1701
DNase1 QIAGEN Cat# 79254
DNase1 Thermofisher Scientific Cat# 18068015
Lipofectamine RNAiMAX Invitrogen Cat# 13778-150
Collagenase Type II from Clostridium histolyticum Sigma Cat# C6885
NuPAGE 4-12% Bis-Tris Protein Gels, 1.5 mm, 10-well Novex Cat# NP0335BOX
NuPAGE MOPS SDS Running Buffer (20X) Novex Cat# NP0001
NuPAGE LDS Sample Buffer (4X) Novex Cat# NP0007
iBlot Transfer Stack, nitrocellulose, regular size Invitrogen Cat# IB301001
Dual Color Standards BIO-RAD Cat# 1610374
Bovine Serum Albumin Sigma Cat# A7906
Immobilon Western (Chemiluminescent HRP Substrate) Millipore Cat# WBKLS0500
ECL Western Blotting Detection Reagents GE Healthcare Cat# RPN2106
Dolethal 200mg/mL Solution for injection Vetoquinol UK Ltd N/A

Critical Commercial Assays

RNAeasy Mini Kit QIAGEN Cat# 74106
Qiashredder QIAGEN Cat# 79656
Human total GLP-1 Meso Scale Discovery Cat# K150JVC-1
Human Active GLP-1 R&D Systems Cat# DY957
Human Insulin Diasorin Cat# 310360
Human GDF15 Elisa R&D Systems Cat# DY957
Human FGF21 Elisa R&D Systems Cat# DF2100
Human Leptin Elisa In-house platform system using R&D Leptin: Cat # MAB398, BAM398 and 398-LP https://www.cuh.nhs.uk/core-biochemical-assay-laboratory
Mouse GDF15 Elisa R&D Systems Cat# DY6385
Mouse FGF21 Elisa R&D Systems Cat# MF2100
Mouse Leptin/insulin 2-Plex Meso Scale Discovery Cat# K15124C

Experimental Models: Cell Lines

Mouse Embryonic Fibroblasts (MEFs) Dr David Ron (CIMR) (Scheuner et al., 2001, Harding et al., 2003)
HeLa ATCC Cat# CCL-2; RRID: CVCL_0030
HuH7 Dr Albert Pol, IDIBAPS, Barcelona Cat# JCRB0403; RRID: CVCL_0336
A549 ATCC Cat# CCL-185; RRID: CVCL_0023
3T3-L1 Zenbio Cat# SP-L1-F

Experimental Models: Organisms/Strains

M. musculus: C57BL/6J mice strain Charles River JAX C57BL/6J; RRID: IMSR_JAX:000664
M. musculus: C57BL/6J mice strain In House (University of Cambridge) N/A; RRID: IMSR_JAX:000664
M. musculus: C57BL/6N mice strain Taconic C57BL/6NTac; RRID: MGI:5658006

Oligonucleotides

Control siRNA Dharmacon Cat# D-001810-10-20
DDIT3 siRNA smartpool On-target Plus Dharmacon Cat# L-062068-00-0005
Human GDF15 Taqman assay Thermo Fisher Scientific Cat# Hs00171132_m1
Human FGF21 Taqman assay Thermo Fisher Scientific Cat# Hs00173927_m1
Mouse GDF15 Taqman assay Thermo Fisher Scientific Cat# Mm00442228_m1
Mouse FGF21 Taqman assay Thermo Fisher Scientific Cat# Mm00840165_g1
Human GAPDH Taqman assay Thermo Fisher Scientific Cat# Hs02758991_g1
Human HPRT Taqman assay Thermo Fisher Scientific Cat# Hs02800695_m1
Mouse HPRT Forward (AGCCTAAGATGAGCGCAAGT); Mouse HPRT Reverse (GGCCACAGGACTAGAACACC) This paper N/A
Mouse B2M Forward (ACTGATACATACGCCTGCAGAGTT); Mouse B2M Reverse (TCACATGTCTCGATCCCAGTAGA) This paper N/A
Mouse 36b4 Forward (AGATGCAGCAGATCCGCAT); Mouse 36b4 Reverse (GTTCTTGCCCATCAGCACC) This paper N/A
Mouse F4/80 Forward CAGATACAGCAATGCCAAGCA; Mouse F4/80 Reverse GATTGTGAAGGTAGCATTCACAAGTG; Mouse F4/80 Probe FAM- GCAGGGCAGGGATCTTGGTTATGC-TAMRA This paper N/A
Mouse CHOP Forward (CCACCACACCTGAAAGCAGAA); Mouse CHOP Reverse (AGGTGAAAGGCAGGGACTCA) This paper (Oslowski and Urano, 2011)
Mouse ATF4 Forward (GGGTTCTGTCTTCCACTCCA); Mouse ATF4 Reverse (AAGCAGCAGAGTCAGGCTTTC) This paper (Oslowski and Urano, 2011)

Software and Algorithms

GraphPad PRISM 7 1992-2017 GraphPad Software RRID: SCR_000306
Illustrator (CS6) Adobe RRID: SCR_010279
Photoshop (CS6) Adobe RRID: SCR_014199

Other

Chow diet (mouse studies) Safe Diets Cat# R105-25
Chow diet (mouse studies) Purina (Lab Diet) Cat# 5053
45% High Fat Diet (mouse studies) Research Diets Cat# D12451i
E Ensure Plus Abbot Laboratories N/A
ImageQuant LAS 4000 GE Healthcare Cat# 28955810
Nanodrop 2000 Thermofisher Scientific N/A
FastPrep-24 MP Biomedical Cat# 116004500
AlphaTrack2 Glucometer Abbot Laboratories Cat# CFMU305-H0201
AlphaTrack2 strips Zoetis Cat# 71681-01
Hematocrit tubes Na-Heparinized Hawksley Cat# 01605-00
Microtube 1.1 mL Z Gel Sarstedt AG & Co Cat# 41.1378.005
Microtube 1.1 mL Z Gel Sarstedt AG & Co Cat# 41.1500.005
Lysing Matrix D, 2 mL Tube MP Biomedical Cat# 116913100
Sterile Cell strainer (100 μm nylon mesh) Fisherbrand 22363549
Minispec LF series (TD-NMR) Bruker Cat# LF50
Lunar PIXImus Mouse Densitometer GE Healthcare Systems N/A
iBlot Dry Blotting System Invitrogen N/A
PowerPac Universal Power Supply BIO-RAD Cat# 1645070
XCell SureLock Mini-Cell Electrophoresis System Invitrogen Cat# EI0001
QuantStudio 7 Flex Real-Time PCR System ThermoFisher Scientific Cat# 4485701