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. 2019 Feb 27;16(151):20180943. doi: 10.1098/rsif.2018.0943

Table 2.

Comparison of ABC methods for the enzyme kinetics model inference problem. Estimates of the posterior mean are given along with the 95% CIs. Signed relative errors are shown for the confidence interval limits with respect to the true parameter values k1 = 0.001, k2 = 0.005 and k3 = 0.01. Computations are performed using an Intel® CoreTM i7-5600U CPU (2.6 GHz).

method posterior mean estimate relative error compute time
ABC rejection k^1=1.0098×103±1.7011×104 [16.0%,18.0%] 2037 (s)
sampler k^2=7.7203×103±7.3490×104 [39.7%,69.1%]
k^3=1.5164×102±2.1201×103 [30.4%,72.8%]
ABCMCMC k^1=3.0331×104±7.5670×105 [77.2%,62.1%] 2028 (s)
k^2=5.8106×103±7.9993×104 [0.2%,32.2%]
k^3=3.3865×102±3.0187×103 [208.5%,268.8%]
ABCSMC k^1=9.8972×104±1.4630×104 [15.7%,13.6%] 342 (s)
k^2=9.2680×103±9.1997×104 [67.0%,103.8%]
k^3=1.3481×102±1.3278×103 [21.5%,48.1%]
ABCMLMC k^1=1.0859×103±6.7058×105 [1.9%,15.3%] 795 (s)
k^2=6.8111×103±3.2107×104 [29.9%,42.6%]
k^3=1.3663×102±1.0729×103 [25.9%,47.4%]