Table 2.
Data set | Tissue Type (No. of Cases) | CCL5 | CCL7 | CCL11 | CCL17 | CCL20 | CCL22 | CCL25 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FC | p | FC | p | FC | p | FC | p | FC | p | FC | p | FC | p | ||
Bittner | Ductal (n = 260) | 1.4 | 0.02 | 1.5 | 0.002 | 1.4 | 0.008 | — | — | 1.5 | 0.008 | 1.1 | 0.3 | −1.1 | 0.7 |
Lobular (n = 38) | −1.1 | 0.7 | −1.6 | 1 | 1.3 | 0.25 | — | — | −1.6 | 1 | −1.2 | 1 | −1.1 | 0.8 | |
Boersma78 | Ductal (n = 83) | 1.1 | 0.4 | 1.2 | 0.014 | 1.3 | 0.003 | 1 | 0.3 | 1.1 | 0.3 | −1.2 | 0.7 | 1.3 | 0.008 |
Lobular (n = 10) | 1.1 | 0.4 | −1.2 | 1 | −1.3 | 1 | −1 | 0.7 | −1.1 | 0.7 | 1.2 | 0.2 | −1.3 | 1 | |
Curtis23 | Ductal (n = 1556) | 1 | 0.36 | 1 | 0.002 | 1 | 0.02 | — | — | 1 | 1.3e−4 | 1.1 | 2.3e−9 | 1 | 0.4 |
Medullary (n = 32) | 3.3 | 1e −7 | 1.3 | 0.007 | 1 | 0.2 | — | — | 1.4 | 0.002 | 1.2 | 0.02 | 1.2 | 4.1e−4 | |
Lobular (n = 148) | 1.1 | 0.14 | −1.1 | 1 | −1 | 1 | — | — | −1.1 | 1 | −1.1 | 1 | −1 | 1 | |
Desmedt79 | Ductal (n = 158) | 1.5 | 0.06 | 1.3 | 0.09 | 1.1 | 0.3 | — | — | 1.2 | 0.2 | 1.1 | 0.3 | 1 | 0.4 |
Lobular (n = 13) | −1.2 | 0.9 | −1.4 | 1 | −1.1 | 0.8 | — | — | −1.2 | 0.7 | −1.3 | 0.9 | −1 | 0.6 | |
Esserman80 | Ductal (n = 105) | 1.1 | 0.4 | 1.9 | 0.04 | 1.3 | 0.05 | 1.1 | 0.4 | −1.1 | 0.7 | −1.1 | 0.7 | 1 | 0.4 |
Lobular (n = 8) | 1.1 | 0.4 | −2.3 | 1 | −1.2 | 0.9 | −1.2 | 00.8 | 1.2 | 0.3 | 1.1 | 0.3 | 1 | 0.4 | |
Ginester24 | Ductal (n = 45) | −3.8 | 1 | −1.3 | 0.8 | −1.3 | 0.74 | 1 | 0.23 | −3.2 | 1 | 1.2 | 0.84 | −1.1 | 0.7 |
Medullary (n = 5) | 8.5 | 0.004 | 1.8 | 0.07 | 1.8 | 0.13 | 1 | 0.335 | 6 | 0.012 | 1.2 | 0.11 | 1.2 | 0.08 | |
Lu26 | Ductal (n = 95) | 1.2 | 0.13 | 1.4 | 0.04 | 1.1 | 0.2 | — | — | 3.5 | 9.9e −5 | 1 | 0.5 | −1 | 0.5 |
Lobular (n = 19) | −1.2 | 0.8 | −1.3 | 0.9 | −1.1 | 0.8 | — | — | −2.7 | 1 | 1.3 | 0.2 | −1 | 0.5 | |
MA281 | Ductal (n = 32) | −1.6 | 0.9 | 1 | 0.3 | −1.1 | 0.8 | 1.1 | 0.14 | −1.1 | 0.6 | 1.1 | 0.4 | −1.1 | 0.7 |
Lobular (n = 3) | 3.7 | 0.06 | −1 | 0.8 | −1.1 | 0.7 | −1 | 0.7 | −1.1 | 0.8 | −1.1 | 0.6 | −1 | 0.6 | |
MA381 | Ductal (n = 51) | −1.2 | 0.7 | 1 | 0.4 | −1.2 | 0.8 | 1.1 | 0.3 | −1.1 | 0.6 | −1.2 | 0.9 | 1 | 0.4 |
Lobular (n = 3) | 1.8 | 0.2 | 1 | 0.3 | 1.4 | 0.04 | 1.3 | 0.2 | −1.1 | 0.6 | 1.9 | 0.1 | 1.1 | 0.4 | |
MA482 | Ductal (n = 18) | −1 | 0.61 | — | — | −1.1 | 0.8 | −1.1 | 1 | −1.2 | 0.6 | −1.2 | 1 | −1 | 0.5 |
Ductal in situ (n = 20) | 1.9 | 0.04 | — | — | 1.1 | 0.2 | 1.1 | 0.04 | 1.2 | 0.4 | 1.2 | 0.07 | 1 | 0.5 | |
Perou27 | Ductal (n = 54) | 1.1 | 0.4 | −1 | 0.5 | 1 | 0.4 | — | — | — | — | — | — | −1.7 | 1 |
Lobular (n = 4) | −1 | 0.7 | 1 | 0.5 | −1 | 0.6 | — | — | — | — | — | — | 1.7 | 0.03 | |
Pollack83 | Ductal (n = 105) | −1.1 | 0.63 | 1.6 | 0.1 | 1.3 | 0.3 | — | — | — | — | — | — | −2.5 | 0.8 |
Lobular (n = 8) | 1.1 | 0.4 | −1.6 | 0.9 | −1.3 | 0.8 | — | — | — | — | — | — | 2.5 | 0.2 | |
Radvanyi25 | Ductal (n = 26) | — | — | — | — | 2.8 | 1e−4 | 1.3 | 0.3 | 1.7 | 0.4 | 1.3 | 0.2 | −1.3 | 0.7 |
Lobular (n = 4) | — | — | — | — | −1.7 | 0.9 | 1.5 | 0.2 | −1.1 | 0.8 | 1.9 | 0.04 | 1.1 | 0.3 | |
Ductal in situ (n = 2) | — | — | — | — | −2.8 | 1 | −1.3 | 0.7 | −1.7 | 0.6 | 1.8 | 0.1 | 1.3 | 0.3 | |
Schuetz84 | Ductal (n = 5) | 1.3 | 0.25 | — | — | 1.2 | 0.03 | −1.1 | 0.9 | −1.4 | 1 | −1.1 | 0.9 | 1 | 0.4 |
Ductal in situ (n = 5) | −1.3 | 0.73 | — | — | −1.2 | 1 | 1.1 | 0.15 | 1.4 | 0.02 | 1.1 | 0.15 | −1 | 0.6 | |
Sorlie85 | Ductal (n = 66) | 1.5 | 0.1 | 1.2 | 0.2 | 1.5 | 0.08 | — | — | — | — | — | — | −2 | 0.9 |
Lobular (n = 5) | −1.2 | 0.6 | −1.2 | 0.8 | −1.5 | 0.83 | — | — | — | — | — | — | 2.8 | 0.2 | |
Sorlie286 | Ductal (n = 132) | 1.2 | 0.3 | — | — | 1.4 | 0.05 | — | — | — | — | — | — | — | — |
Lobular (n = 11) | −1 | 0.5 | — | — | −1.5 | 0.92 | — | — | — | — | — | — | — | — | |
Tabchy87 | Ductal (n = 163) | −1.3 | 0.9 | 1.1 | 0.12 | −1 | 0.8 | −1 | 0.81 | 1.2 | 0.2 | −1.1 | 0.9 | −1.1 | 0.9 |
Lobular (n = 7) | 1.5 | 0.11 | −1 | 0.8 | 1.1 | 0.09 | 1.1 | 0.3 | −1.2 | 0.7 | 1.1 | 0.1 | 1.2 | 0.1 | |
TCGA | Ductal (n = 392) | 1.7 | 0.2 | 2.1 | 2.5e−6 | −2.4 | 0.8 | 1.5 | 0.2 | −1.4 | 0.7 | −1.1 | 0.6 | 1.2 | 0.2 |
Lobular (n = 36) | 1.4 | 0.04 | −1.8 | 1 | −1 | 0.7 | 1.3 | 0.03 | −1.1 | 0.8 | 1 | 0.4 | −1 | 0.5 | |
Ductal in situ (n = 3) | — | — | — | — | 2.1 | 0.1 | −1.3 | 0.7 | 2 | 0.2 | 2.6 | 0.1 | 1.4 | 0.02 | |
Turashvili88 | Ductal (n = 5) | 1.5 | 0.3 | −1.6 | 0.8 | 2 | 0.2 | −1 | 0.5 | −1.1 | 0.6 | 1.1 | 0.4 | −1 | 0.5 |
Lobular (n = 5) | −1.1 | 0.5 | 1.6 | 0.2 | −2 | 0.8 | 1 | 0.5 | 1.1 | 0.4 | −1.1 | 0.5 | 1 | 0.5 | |
Zhao89 | Ductal (n = 39) | 1.3 | 0.01 | −1.2 | 0.81 | −1.1 | 0.6 | — | — | — | — | 1 | 0.3 | — | — |
Lobular (n = 21) | −1.1 | 0.7 | 1.2 | 0.2 | 1.1 | 0.4 | — | — | — | — | −1 | 0.7 | — | — |
Histological types of 7 CC chemokines over-expressed in BrCa compared to normal tissues were determined utilizing all datasets available in ONCOMINE.
Bold represents significant RNA expression with a cut off of: fold change (FC) ≥ 1.4 and p-value ≤ 0.04 using t-test.