Figure 6.

HMM search for prophages in Vibrio genomes with proven phage activities.Family specific HMMs constructed for Ino-, Myo-, Podo-, andSiphoviridae (grouped on x-axis) were used to scan all proteins derived from the genome of nine V. alginolyticus and one V. typhli genomes (x-axis per phage family grouping). In all of the V. alginolyticus genomes, regions encoding proteins matching to the profile HMMs were found (plotted per position and grouped per replicon on the y-axis). In cases where a region with consecutive HMM hits predicted as well by PHASTER was separately faceted.