Table 1.
Identifications of DEPs in rice in response to different fungal isolate infection.
No a | Gi b | Protein Description | MW c (KDa) | pI d | Peptides matched | Cov (%) e |
---|---|---|---|---|---|---|
1 | gi|115479725 | Heat shock 90 kDa protein | 75.0 | 8.94 | 10 | 18 |
2 | gi|115459660 | Elongation factor G (EF-G) family | 42.1 | 5.47 | 12 | 41 |
3 | gi|573913556 | Histone-lysine N-methyltransferase ATX4-like | 105.0 | 7.65 | 3 | 5 |
4 | gi|115486793 | Heat shock 70 kDa protein | 71.5 | 5.10 | 7 | 16 |
5 | gi|115469362 | V-type proton ATPase catalytic subunit A | 68.7 | 5.20 | 16 | 39 |
6 | gi|115466004 | Similar to 60 kDa chaperonin (Protein Cpn60) | 64.3 | 5.60 | 10 | 25 |
7 | gi|115450022 | Zn-dependent oligopeptidases | 86.5 | 5.76 | 9 | 14 |
8 | gi|115448989 | Molecular chaperone DnaK | 73.1 | 5.49 | 13 | 26 |
9 | gi|115440691 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | 61.0 | 5.42 | 6 | 14 |
10 | gi|347602486 | Chaperone protein ClpC1, chloroplastic | 101.9 | 6.14 | 33 | 41 |
11 | gi|115487910 | Chaperone protein ClpC2, chloroplastic | 102.1 | 6.62 | 9 | 12 |
12 | gi|115454943 | NADH dehydrogenase subunit G | 82.1 | 5.86 | 15 | 33 |
13 | gi|115458140 | Similar to Glycyl-tRNA synthetase | 32.8 | 5.47 | 5 | 22 |
14 | gi|75225211 | Putative aconitate hydratase | 98.6 | 5.67 | 18 | 22 |
15 | gi|115439655 | NADP-dependent malic enzyme | 65.6 | 8.59 | 9 | 23 |
16 | gi|115489652 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase | 84.9 | 5.93 | 12 | 24 |
17 | gi|115468926 | glycine dehydrogenase | 97.9 | 5.98 | 9 | 10 |
18 | gi|115448531 | Glutamine synthetase | 39.4 | 5.51 | 5 | 17 |
19 | gi|3024122 | S-adenosylmethionine synthase 2 | 43.3 | 5.68 | 10 | 31 |
20 | gi|115450493 | Glyceraldehyde-3-phosphate dehydrogenase B | 47.5 | 6.22 | 8 | 23 |
21 | gi|115482032 | GDP-mannose-3,5-epimerase (GME)-like | 43.1 | 5.75 | 7 | 25 |
22 | gi|115461951 | S-denosylmethionine synthetase 1 | 43.6 | 5.74 | 14 | 37 |
23 | gi|115484401 | Fructose-bisphosphate aldolase | 42.2 | 6.38 | 8 | 35 |
24 | gi|115445243 | Similar to Class III peroxidase | 34.8 | 5.32 | 4 | 23 |
25 | gi|115482534 | Cytoplasmic malate dehydrogenase | 35.9 | 5.75 | 10 | 36 |
26 | gi|115477837 | Copper/zinc superoxide dismutase (SOD) | 21.4 | 5.79 | 5 | 41 |
27 | gi|937924719 | Similar to Photosystem II stability/assembly factor HCF136, chloroplastic | 42.9 | 9.05 | 8 | 27 |
28 | gi|125537696 | ferredoxin-NADP(+) reductase | 41.1 | 8.26 | 4 | 10 |
29 | gi|115435022 | Similar to Acid phosphatase | 33.2 | 6.33 | 10 | 30 |
30 | gi|115450565 | Similar to Glutathione S-transferase GSTF14 | 35.7 | 7.04 | 6 | 27 |
31 | gi|115439261 | Similar to Guanine nucleotide-binding protein subunit beta-like protein | 36.7 | 5.97 | 8 | 34 |
32 | gi|115443911 | Similar to NADPH-dependent mannose 6-phosphate reductase | 42.1 | 8.16 | 6 | 16 |
33 | gi|115436780 | Similar to Photosystem II oxygen-evolving complex protein 1 | 34.8 | 4.96 | 3 | 21 |
34 | gi|115488968 | Nucleoside diphosphate kinase | 23.6 | 9.51 | 3 | 11 |
35 | gi|115453797 | Haloacid dehalogenase-like hydrolases | 34.1 | 8.36 | 6 | 25 |
36 | gi|115474285 | L-ascorbate peroxidase | 27.2 | 5.21 | 7 | 45 |
37 | gi|218189522 | Phage shock protein A (IM30) | 35.1 | 9.08 | 5 | 16 |
38 | gi|115447465 | Similar to ATP-dependent Caseinolytic protease (ClpP) proteolytic subunit | 32.1 | 6.71 | 7 | 22 |
39 | gi|297604125 | Similar to Chitinase | 32.8 | 6.08 | 10 | 26 |
40 | gi|115461679 | NAD-dependent epimerase/dehydratase family protein | 31.4 | 9.13 | 6 | 31 |
41 | gi|115463555 | Beta-glucanase | 34.7 | 5.92 | 5 | 23 |
42 | gi|115446541 | Similar to 2-cys peroxiredoxin BAS1 | 28.3 | 5.67 | 3 | 42 |
43 | gi|115486898 | Eukaryotic ferritins | 28.3 | 5.47 | 6 | 29 |
44 | gi|115470529 | photosystem II oxygen-evolving enhancer protein 2 | 27.1 | 8.66 | 5 | 28 |
45 | gi|115476760 | Cupin_1; Similar to Germin-like protein 1 | 22.0 | 6.01 | 1 | 10 |
46 | gi|115436320 | Dihydrolipoamide dehydrogenase family protein | 53.0 | 7.21 | 5 | 18 |
47 | gi|115460656 | Similar to Aminomethyltransferase | 44.3 | 8.53 | 7 | 19 |
48 | gi|115477148 | Serine-glyoxylate aminotransaminase | 44.4 | 8.19 | 4 | 18 |
49 | gi|115478779 | Outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) | 29.2 | 7.07 | 6 | 28 |
50 | gi|115460338 | Heme-dependent peroxidases | 38.4 | 8.67 | 14 | 42 |
a: Numbers correspond to the 2-DE gel in Figure 2. b: Protein Gi number in NCBI. c,d: Theoretical molecular weight and pI value. e: Sequence coverage percentage.