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. 2019 Feb 20;10(2):162. doi: 10.3390/genes10020162

Figure 3.

Figure 3

Chicken ERV phylogenetic tree based on Gag and Pol motifs as previously described [4,25]. Thick blue lines indicate reference retroviral and ERV sequences. Candidate ERV-associated loci differences between the H, L, and W chicken are indicated by symbols next to the ERV IDs referring to the RetroTector analysis of the chicken (galGal3) assembly (see FASTA sequences and loci annotations in Supplementary Information Data S1). The complete phylogenetic tree is presented in nexus file format (Supplementary Information Data S2) for rendering in a tree drawing software such as FigTree.