Table 1.

List of molecular classification and prognostication algorithms in genefu

Molecular subtype classification algorithms (×9)
	Single Sample Predictors (SSP2003, SSP2006 and PAM50)
	Subtype Clustering Models (SCMOD1, SCMOD2 and SCMGENE)
	Claudin-low
	IntClust
	AIMS
Prognostication of breast cancer (×12)	Prognostic predictor	Prognostic signature
	EndoPredict	sig.endoPredict
	GENE70	GENE70 signature
	GENE76	GENE76 signature
	GENIUS	sig.genius signatures
	GGI	sig.ggi 97-gene signature
	Nottingham prognostic index calculation (NPI)
	OncotypeDX	Oncotypedx signature
	PIK3CA signature	PIK3CA-GS: PIK3CA signature
	Risk of relapse based on subtype (RORS)
	mod1 (gene modules)	Mod1: list of seven gene modules
	mod2 (gene modules)	Mod2: list of three gene modules
	IHC4
	TAMR13 predictor	TAMR13 signature