Table 1.
Phase | Study | EAa | OAb | EAFc | Allele frequencyd | OR (95% CI) | P e | ||
---|---|---|---|---|---|---|---|---|---|
Case | Control | Case | Control | ||||||
Discovery | NJMU(Nanjing) | G | C | 0.37 | 0.41 | 192.0/702.0/579.0 | 331.0/943.0/688.0 | 0.89(0.79–0.99) | 3.34E−02 |
NJMU(Beijing) | G | C | 0.34 | 0.41 | 109.0/369.0/380.0 | 182.0/545.0/388.0 | 0.71(0.62–0.82) | 1.46E−06 | |
Validation I | NJMU Validation (Nanjing) | G | C | 0.35 | 0.40 | 74.0/370.0/293.0 | 124.0/352.0/273.0 | 0.81(0.69–0.96) | 1.22E−02 |
NJMU Validation (Beijing) | G | C | 0.30 | 0.38 | 150.0/630.0/734.0 | 234.0/669.0/571.0 | 0.68(0.60–0.76) | 1.25E−11 | |
Validation II | MDACC | G | C | 0.31 | 0.33 | 99.9/510.0/540.1 | 124.1/507.8/502.1 | 0.89(0.77–1.00) | 4.67E−02 |
FLCCA | G | C | 0.40 | 0.43 | 858.3/2133.7/1804.0 | 731.1/1738.3/1271.6 | 0.91(0.85–0.97) | 4.90E−03 | |
NCI | G | C | 0.30 | 0.31 | 516.0/2424.3/2775.7 | 582.9/2433.4/2804.7 | 0.93(0.87–0.98) | 1.18E−02 | |
META | G | C | 0.87(0.84–0.90) | 1.76E−`15 |
aEffect allele.
bOther allele.
cEffect allele frequency.
dEA homozygote/heterozygote/OA homozygote.
eAdjusted by age, gender, smoking status (or py) and PC(s).