Antibodies |
|
|
Anti-CD31 (clone WM59) BV421 |
Biolegend |
Cat#303123; RRID: AB_2562179 |
Anti-CD26 (clone BA5b) APC |
Biolegend |
Cat#302709; RRID: AB_10913814 |
Anti-CD271 (clone ME20.4) PE |
Biolegend |
Cat#345105; RRID: AB_2282827 |
Anti-CD326 (clone EBA-1) BB515 |
BD |
Cat#565398; RRID: AB_2728107 |
Anti-CD45 (clone HI30) PerCP/Cy5.5 |
Tonbo |
Cat#65–0459; RRID: AB_2621897 |
Anti-CD200 (clone OX-104) BV711 |
Biolegend |
Cat#329223; RRID: AB_2715823 |
Anti-PDPN (clone NC-08) PE |
Biolegend |
Cat#337004; RRID: AB_1595554 |
Rabbit anti-PSCA |
Abcam |
Cat#Ab64919; RRID: AB_1142338 |
Donkey anti-rabbit IgG BV421 |
Biolegend |
Cat#406410; RRID: AB_10897810 |
Chicken anti-KRT5 |
Biolegend |
Cat#905901; RRID: AB_2565054 |
Anti-MYH11 (clone MYH11/923) |
LS Bio |
Cat#LS-C390741–100; RRID: AB_2728109 |
Rabbit anti-Decorin |
Sigma Aldrich |
Cat# HPA003315; RRID: AB_1078639 |
Rabbit anti-DHRS7 |
Sigma Aldrich |
Cat#HPA031121; RRID: AB_10600803 |
Guinea pig anti-KRT8/18 |
Fitzgerald |
Cat#20R-CP004; RRID: AB_1284055 |
Anti-KRT14(clone LL002) |
Thermo Scientific |
Cat#ms-115-p0; RRID: AB_63786 |
Anti-KRT13 (clone EPR3671) |
Abcam |
Cat#ab92551; RRID: AB_2134681 |
Anti-SCGB1A1 (clone 394324) |
Novus Biologicals |
Cat# MAB4218-SP; RRID: AB_2183286 |
Anti-CHGA (clone CHGA(419)) |
Sigma Aldrich |
Cat#SAB4200728; RRID: AB_2728111 |
Rabbit anti-SCG2 |
Sigma Aldrich |
Cat#HPA011893; RRID: AB_1856656 |
Goat anti-chicken Alexa488 |
Jackson Immunoresearch |
Cat#103-545-155; RRID: AB_2337390 |
Goat anti-mouse Alexa546 |
Thermo Scientific |
Cat#A11030; RRID: AB_2534089 |
Goat anti-rabbit Alexa633 |
Thermo Scientific |
Cat#A21070; RRID: AB_2535731 |
Goat anti-rabbit Alexa594 |
Jackson Immunoresearch |
Cat#111-516-045; RRID: AB_2728112 |
Goat anti-guinea pig Alexa647 |
Jackson Immunoresearch |
Cat#106-605-003; RRID: AB_2337446 |
Biological Samples |
|
|
Donor 1, Age 31, prostate weight 23 g Used in Figures 1B, 2A–2C, and 5
|
Southwest Transplant Alliance |
N/A |
Donor 2, Age 25, prostate weight 15 g Used in Figures 1B, 2A–2C, and 5
|
Southwest Transplant Alliance |
N/A |
Donor 3, Age 29, prostate weight 20 g Used in Figures 1B, and 5
|
Southwest Transplant Alliance |
N/A |
Donor 4, Age 18, prostate weight 16 g Used in Figures 3C and 4C
|
Southwest Transplant Alliance |
N/A |
Donor 5, Age 18, prostate weight 18 g Used in Figures 3C and 4C
|
Southwest Transplant Alliance |
N/A |
Donor 6, Age 19, prostate weight 17 g Used in Figures 3C and 4C
|
Southwest Transplant Alliance |
N/A |
Donor 7, Age 19, prostate weight 18 g Used in Figures 5C and 5D
|
Southwest Transplant Alliance |
N/A |
Donor 8, Age 24, prostate weight 15 g Used in Figures 5C and 5D
|
Southwest Transplant Alliance |
N/A |
Donor 9, Age 21, prostate weight 17 g Used in Figures 5C and 5D
|
Southwest Transplant Alliance |
N/A |
Donor 10, Age 18, prostate weight 18 g Used in Figures 5C and 5D
|
Southwest Transplant Alliance |
N/A |
Donor 11, Age 22, prostate weight 14 g Used in Figures 5C and 5D
|
Southwest Transplant Alliance |
N/A |
Deposited Data |
|
|
Bulk and single cell sequencing of human prostate cells |
GEO database |
GSE120716 |
All raw data |
GUDMAP database |
https://doi.org/10.25548/W-R8CM |
Oligonucleotides |
|
|
see Table S5
|
This paper |
N/A |
Software and Algorithms |
|
|
R code for scRNA-seq analysis |
Strand Lab |
https://git.biohpc.swmed.edu/StrandLab/sc-TissueMapper_Pr |