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. 2018 Nov 22;4(12):e000232. doi: 10.1099/mgen.0.000232

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© 2018 The Authors

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 4. — Variation in IS26 amongst 34 ST15 K. pneumoniae isolates from an NDM-1 outbreak. TETyper output is annotated alongside a maximum likelihood phylogeny that was generated using IQ-TREE version 1.3.13 [38], after mapping to the MGH78578 reference as previously described [30]. Branch lengths are shown as SNVs per genome.