Table 1. Genome metrics of bacterial isolates identified from necrotic lesions of AOD-affected trees.
| Organism (accession) | Family | Origin | No. of contigs | No. of genes (gene density %) | Degree of orthology (degree of virulence orthology) | Chromosome size (bp)/GC content (mol%) |
|---|---|---|---|---|---|---|
|
Gibbsiella quercinecans
FRB97 (CP014136) |
Enterobacteriacae | Hoddesdon Park, UK [5] | 1 | 5125 (86.9) | 21 (16) | 5 548 506 (56) |
| Gibbsiella quercinecans FRB124 (MJLV00000000) | Enterobacteriacae | Outwood, UK [5] | 90 | 4852 (86.6) | 23 (16) | 5 469 793 (56) |
|
Gibbsiella quercinecans
N78 (MJLW00000000) |
Enterobacteriacae | Burgos, Spain [5] | 129 | 5202 (86.4) | 2 (0) | 5 693 731 (56) |
|
Brenneria goodwinii
FRB141 (CP014137) |
Pectobacteriacae | Outwood, UK [6] | 1 | 4625 (85.8) | 20 (20) | 5 281 917 (51) |
|
Brenneria goodwinii
FRB171 (MJLY00000000) |
Pectobacteriacae | Gorse Covert, UK [6] | 128 | 4881 (86.1) | 18 (20) | 5 377 922 (53) |
|
Lonsdalea britannica 477 (CP023009) |
Pectobacteriacae | Surrey, UK [34] | 1 | 3801 (87.2) | 15 (20) | 4 015 589 (55) |
| Rahnella variigena CIP105588T (NSDJ00000000) | Yersiniaceae | Culture collection (representative strain) [35] | 2 | 5187 (89.7) | 21 (20) | 5 499 108 (52) |
|
Rahnella victoriana
BRK18a (MAEN01000001) |
Yersiniaceae | Brock Hampton, UK [35] | 2 | 5230 (90.2) | 23 (20) | 5 563 295 (53) |