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. Author manuscript; available in PMC: 2019 Mar 12.
Published in final edited form as: J Phys Chem B. 2018 Jun 1;122(23):6215–6223. doi: 10.1021/acs.jpcb.8b04584

Figure 2.

Figure 2.

Conformational changes (top panel) and penetrated water molecules (bottom panel) around the ionizable groups. The root-mean-square deviations (rmsd) are calculated against the X-ray structures. Local residues are those with any atom within 6 Å from the ionizable groups. Penetrated water molecules are counted within 6 Å from the ionizable groups. The error bars represent the standard deviations of the water numbers.