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. 2018 Oct 16;21(2):183–189. doi: 10.4103/aja.aja_79_18

Table 2.

Summary of the new DPY19L2 variants found in the investigated globozoospermic patients

Patients mRNA change Protein change Variant type Max allele frequency GERP (prediction of conservation) Zygosity
P3 c.2126+5G>A - Splice region variant 0 3.78 Heterozygous
P6 c.1720C>T p.Arg574Ter Nonsense 0 2.51 Homozygous
P8 c.1182_1184delATC p.Leu394_Ser395delinsPhe Inframe deletion <0.0001 1.37 Compound heterozygous
c.368A>G p.His123Arg Missense 0 2.5
P9 c.1182_1186delATCTT p.Leu394PhefsTer19 Frame shift 0 2.71 Compound heterozygous
c.1553_1554delAT p.Tyr518CysfsTer14 Frame shift <0.0001 3.18

The max allele frequency of the variants was from gnomAD and ExAC databases. Polyphen scores were only suitable to assess the pathogenicity of missense mutations, and the Polyphen score of c.368A>G is 0.998, which means likely pathogenic. GERP: Genomic Evolutionary Rate Profiling