. 2019 Mar 12;14(3):e0212996. doi: 10.1371/journal.pone.0212996

Table 1. Bacterial small RNA-Seq data yield from Hiseq2500 sequencing.

Samples	T. australica NP 3b2^T	T. alkalitolerans JCM 18968^T	T. lucentensis QMT2^T	T. mesophila JCM 18969^T	T. povalilytica Zumi 95^T	T. profundimaris WP0211^T	T. tepidiphila 1-1B^T	T. xiamenensis M-5^T	T. xianhensis P-4^T
Original number of reads^a	22,991,595	31,431,409	28,737,289	27,213,115	28,225,762	25,272,618	25,641,708	28,144,650	24,546,591
Reads after filter and collapse^b	3,177,403	5,068,260	4,606,730	2,954,668	3,761,719	5,327,201	4,368,445	1,712,391	3,300,999
Reads aligning to reference genome^c	2,285,671	160,990	2,511,917	102,497	95,972	2,046,567	1,230,299	1,143,173	631,902
Aligned reads, %	71.94	3.18	54.53	3.47	2.55	38.42	28.16	66.76	19.14

^a: total reads obtained from different bacterial species

^b: reads obtained after filtering

^c: reads were aligned to the Thalassopsira genome sequences using the Bowtie algorithm. The reads obtained from this experiment were set from 18–33 nt using an Illumina genome analyser with a low error rate (0.005 error per base).