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. Author manuscript; available in PMC: 2019 Mar 12.
Published in final edited form as: Am J Med Genet C Semin Med Genet. 2019 Feb 20;181(1):59–67. doi: 10.1002/ajmg.c.31677

Table 1.

Mouse orthologs of human X-Y pair and PAR1 genes.

Chromosomal location
Human Gene Human Mousea
Ancestral X-Y pair genes SOX3/SRY X/Y X/Y
ZFX/ZFY X/Y X/Y
DDX3X/Y X/Y X/Yb
KDM6A/UTY X/Y X/Yb
KDM5C/D X/Y X/Yb
USP9X/Y X/Y X/Y
EIF1AX/Y X/Y X/18c
RPS4X/Y X/Y X/6c
AMELX/Y X/Y X/-
TXLNG/Y X/Y X/-
TMSB4X/Y X/Y X/-
NLGN4X/Y X/Y X/Y (PAR)
TBL1X/Y X/Y X/-
PRKX/Y X/Y X/-
PAR genes PLCXD1 X/Y (PAR1) 5
GTPBP6 X/Y (PAR1) 5d
PPP2R3B X/Y (PAR1) 9
SHOX X/Y (PAR1) -e
CRLF2 X/Y (PAR1) 5
CSF2RA X/Y (PAR1) 19f
IL3RA X/Y (PAR1) 14g
SLC25A6 X/Y (PAR1) -g
ASMTL X/Y (PAR1) -
P2RY8 X/Y (PAR1) -
AKAP17A X/Y (PAR1) X/Y (PAR)
ASMT X/Y (PAR1) X/Y (PAR)
DHRSX X/Y (PAR1) 4d
ZBED1 X/Y (PAR1) -d
CD99 X/Y (PAR1) 4h

PAR = pseudoautosomal region

a

For X-Y pairs, presence or absence of the Y copy in mouse is confirmed in (Soh et al., 2014).

b

X homolog expressed from both X chromosomes in human and mouse (Berletch et al., 2015; Yang, Babak, Shendure, & Disteche, 2010).

e

Human and mouse have a paralagous gene, SHOX2, on chr3 (Rao et al., 1997).