Table 4.
Number of correct protein-peptide interaction sites identified.
Tested on natives | Tested on models | |
---|---|---|
InterPep | 255 (50.7%) | 805 (49.8%) |
InterPepM | 243 (48.4%) | 844 (52.2%) |
Total sites | 502 (100.0%) | 1617 (100.0%) |
The number of target pairs where the correct peptide-binding site was identified in the top cluster, when trained on native structures or on native and model structures, and tested on native and model structures, respectively.