Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2019 Mar 13;20:211. doi: 10.1186/s12864-019-5574-8

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

PMC Copyright notice

Fig. 1 — Gene regulation by YPR2 in T. reesei. a Schematic representation of the SOR cluster. Genomic locations are taken from the JGI Trichoderma reesei database v2.0 (https://genome.jgi.doe.gov/Trire2/Trire2.home.html). b Hierarchical clustering of gene regulation patterns in ∆ypr2 compared to wildtype in constant light (LL) and constant darkness (DD) upon growth on cellulose. c Numbers of genes regulated in ∆ypr2 in constant light or constant darkness on cellulose (≥2fold, p-value threshold 0.01). d Genes directly or indirectly regulated by YPR2 in constant light overlapping with gene regulation by YPR2 in constant darkness. The diagram shows the proportion of consistent regulation (upregulation in ∆ypr2 in light and darkness, downregulation in light and darkness) or contrasting regulation (upregulation in light and downregulation in darkness (“up”) or downregulation in light and upregulation in darkness (“down”))