Table 1.
SNP distribution patterns (SDP). Distribution of SNPs and alleles in total and per chromosomes I to X for each SDP. Strain names and place of isolation are give in the column headers. At SDP 14, O vs S shows those SNPs different between the two strains isolated from Orsay and the two strains isolated from Santeuil
Total | JU1511, Orsay | JU1926, Santeuil | JU1931, Santeuil | JU1941, Orsay | SDP 12 | SDP 13 | SDP 14, O vs S | |
---|---|---|---|---|---|---|---|---|
Total | 8964 | 2628 | 748 | 1651 | 2137 | 313 | 842 | 518 |
I | 1916 | 288 | 10 | 75 | 1250 | 131 | 109 | 41 |
II | 503 | 254 | 229 | 4 | 4 | 0 | 2 | 3 |
III | 2231 | 979 | 16 | 217 | 476 | 72 | 281 | 158 |
IV | 930 | 178 | 447 | 91 | 14 | 1 | 12 | 162 |
V | 2152 | 104 | 11 | 1257 | 214 | 88 | 303 | 144 |
X | 1232 | 825 | 35 | 7 | 179 | 21 | 135 | 10 |