Figure 6.
A diagrammatic representation of a syntenic region in genomes of three brown algae, Ectocarpus siliculosus (E.si), Cladosiphon okamuranus (C.ok) and Nemacystus decipiens (N.de). This region contains seven genes that encode Ankyrin repeat-containing protein, GDP-fucose pyrophosphorylase (GFPP), l-fucokinase (FK), ST-domain-containing protein, alpha/beta hydrolase, RNA-binding ASCH domain protein, and tyrosinase. In the E. siliculosus genome, all seven genes exist independently. However, in the C. okamuranus and N. decipiens genomes, the gene for l-fucokinase (FK) and the gene for GDP-fucose pyrophosphorylase (GFPP) are fused. In addition, in the N. decipiens genome, genes for ST-domain-containing protein and alpha/beta hydrolase are fused. These fusions are supported by corresponding mRNAs (Supplementary Figs S5 and S6), although the fused mRNA for the latter needs further examination. Insertion of a gene for topoisomerase DNA-binding C4 Zinc Finger protein was discovered in in the N. decipiens genome. Transcriptional direction is shown by the arrowhead. Numbers under genes indicate gene ID numbers.