Table 2. The HA panel of the mPlex-Flu assay.
| Influenza
Virus Type |
Subtypes | Full Name of Viruses | Abbreviation | Genbank
Accession # |
Bead
Region |
|---|---|---|---|---|---|
| A | H1 | A/South Carolina/01/1918 | A/SC18 | AF117241.1 | 35 |
| A/PR/8/34 | A/PR8 | CY148243.1 | 37 | ||
| A/USSR/1977 | A/USSR77 | DQ508897.1 | 55 | ||
| A/Texas/36/91 | A/Tex91 | DQ508889.1 | 43 | ||
| A/New Caledonia/20/1999 | A/NewCal99 | CY125100.1 | 18 | ||
| A/California/07/2009 | A/Cali09 | FJ966974.1 | 54 | ||
| H2 | A/Japan/305/1957 | A/Jap57 | L20407.1 | 19 | |
| H3 | A/HongKong/1/1968 | A/HK68 | CY009348.1 | 53 | |
| A/Port Chalmers/1/1973 | A/PC73 | CY112249.1 | 52 | ||
| A/Perth/16/09 | A/Per09 | GQ293081.1 | 47 | ||
| A/Victoria/361/11 | A/Vic11 | KM821347 | 56 | ||
| A/Texas/50/2012 | A/Tex12 | KC892248.1 | 36 | ||
| A/Switzerland/2013 | A/Swi13 | EPI537866 | 22 | ||
| H5 | A/Viet Nam/1203/2004 | A/Viet04 | EF541403 | 30 | |
| H6 | A/chicken/Taiwan/67/2013 | A/TW13 | KJ162860.1 | 33 | |
| H7 | A/rhea/North Carolina/39482/1993 | A/rheaNC93 | KF695239 | 39 | |
| A/Shanghai/1/2013 | A/SH13 | KF021597.1 | 44 | ||
| H9 | A/guinea fowl/Hong Kong/WF10/1999 | A/gfHK99 | AY206676.1 | 42 | |
| B | B/Malaysia/2506/2004 | B/Maly04 | CY040449.1 | 51 | |
| B/Brisbane/60/2008 | B/Bris08 | CY115343 | 46 | ||
| B/Wiscosin/01/2010 | B/Wis10 | KC306166.1 | 45 | ||
| B/Massachustts/2/2012 | B/Mass12 | KF752446.1 | 65 | ||
| HA domains | Head of A/duck/Czech/1956 | H4 Head | 30 | ||
| Head of A/Shanghai/1/2013 | H7 Head | 25 | |||
| head of A/Indonesia/5/05 | H5 Head | 26 | |||
| Head of A/guinea fowl/Hong Kong/
WF10/1999 |
H9 head | 48 | |||
| Chimeric HA | cH5/1 (A/Indonesia/5/05,
A/California/07/2009) |
cH5/1Cal09 | 27 | ||
| cH9/1 (A/gf/HK/WF10/1999,
A/California/07/2009) |
cH9/1Cal09 | 20 | |||
| cH5/1 (A/Indonesia/5/05,
A/Perth/16/09) |
cH5/3 | 28 | |||
| cH4/1 (A/duck/Czech/1956,
A/Shanghai/1/2013) |
cH4/7 | 29 |
Seasonal Vaccine strains in Bold
Different colors determine the influenza virus type or subtypes. Influenza B virus showed in Green. Bark blue, gray, and light blue, purple and dark green present H1, H2, H5, H6 and H9 subtype influenza viruses, respectively, HA phylogenic group 1 viruses. Red and orange present H3 and H7, HA phylogenic group 2 viruses. Other black present the HA1 domains of HA or chimeric HAs.