Critical Commercial Assays |
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KAPA mRNA Hyper Prep kit |
Roche Sequencing |
Cat# KK8581 |
Deposited Data |
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Duck genome: Anas platyrhynchos
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NCBI |
GCF_000355885.1 |
Chicken genome: Gallus gallus
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NCBI |
GCF_000002315.5 |
Transcriptome of bird trigeminal ganglia |
This paper |
GEO: GSE125754
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Experimental Models: Organisms/Strains |
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American black duck (Anas rubripes) Harlequin duck (Histrionicus histrionicus)
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USGS Patuxent Wildlife Research Center |
N/A |
Lesser Scaup (Aythya affinis)
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Hooded merganser (Lophodytes cucullatus)
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Livingston Ripley Waterfowl Conservancy |
N/A |
Ruddy duck (Oxyura jamaicensis)
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Wood duck (Aix sponsa)
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USGS Patuxent Wildlife Research Center or Livingston Ripley Waterfowl Conservancy |
N/A |
Pekin duck (Anas platyrhynchos domesticus)
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Metzer Farms |
N/A |
Domestic chicken (Gallus domesticus)
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Oligonucleotides |
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Piezo2 in situ RNA probe primer Fwd GACAGTATCTCCAGCTGCTAC |
(Schneider et al., 2014) |
N/A |
Piezo2 in situ RNA probe primer Rev TTATGGACCATCAGCCCTCCCA |
(Schneider et al., 2014) |
N/A |
Software and Algorithms |
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GraphPad Prism 7 |
GraphPad |
RRID:SCR_002798 |
ImageJ |
NIH |
RRID:SCR_003070 |
pClamp |
Molecular Devices |
RRID:SCR_011323 |
MetaFluor |
Molecular Devices |
RRID:SCR_014294 |
Igor Pro 6.3 |
Wavemetrics |
RRID:SCR_000325 |
TaroTools |
Dr. Taro Ishikawa, Jikei University |
N/A |
Trimmomatic |
(Bolger et al., 2014) |
RRID:SCR_011848 |
STAR |
(Dobin et al., 2013) |
RRID:SCR_015899 |
featureCounts |
(Liao et al., 2014) |
RRID:SCR_012919 |
R |
N/A |
RRID:SCR_001905 |
edgeR (package for R) |
(Robinson et al., 2010) |
RRID:SCR_012802 |
Hmisc (package for R) |
N/A |
N/A |
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