Table 1.
Taxa used for phylogenetic analyses in the study.
| Species name | Isolate No.b | GenBank Accession No. | |||
|---|---|---|---|---|---|
| ITS | GAPDH | ACT | TUB | ||
| Colletotrichum agaves | AR3920 | DQ286221 | –a | – | – |
| C. anthrisci | CBS 125334* | GU227845 | GU228237 | GU227943 | GU228139 |
| C. aracearum | LC1041 | KX853167 | KX893586 | KX893578 | KX893582 |
| C. arxii | CBS 132511 | KF687716 | KF687843 | KF687802 | KF687881 |
| C. brevisporum | BCC 38876* | JN050238 | JN050227 | JN050216 | JN050244 |
| C. chlorophyte | IMI 103806* | GU227894 | GU228286 | GU227992 | GU228188 |
| C. citricola | SXC151* | KC293576 | KC293736 | KC293616 | KC293656 |
| C. citri-maximae | AGMy0254* | KX943582 | KX943578 | KX943567 | KX943586 |
| C. cliviae | CBS 125375* | JX519223 | JX546611 | JX519240 | JX519249 |
| C. coccodes | CBS 369.75 | HM171679 | HM171673 | HM171667 | JX546873 |
| C. colombiense | CBS 129818* | JQ005174 | JQ005261 | JQ005522 | JQ005608 |
| C. conoides | CAUG17* | KP890168 | KP890162 | KP890144 | KP890174 |
| C. constrictum | CBS 128504* | JQ005238 | JQ005325 | JQ005586 | JQ005672 |
| C. cordylinicola | ICMP18579* | JX010226 | JX009975 | HM470235 | JX010440 |
| C. dematium | CBS 125.25* | GU227819 | GU228211 | GU227917 | GU228113 |
| C. dracaenophilum | CBS 118199 | JX519222 | JX546707 | JX519238 | JX519247 |
| C. euphorbiae | CPC 21823 | KF777146 | KF777131 | KF777125 | KF777247 |
| C. excelsum-altitudum | CGMCC 3.15130* | HM751815 | KC843502 | KC843548 | JX625211 |
| C. fructi | CBS 346.37* | GU227844 | GU228236 | GU227942 | GU228138 |
| C. fuscum | CBS 133701* | KM105174 | KM105524 | KM105384 | KM105454 |
| C. fusiforme | MFLU 13-0291* | KT290266 | KT290255 | KT290251 | KT290256 |
| C. gigasporum | CBS 133266 | KF687715 | KF687822 | – | KF687866 |
| C. godetiae | CBS 133.44* | JQ948402 | JQ948733 | JQ949723 | JQ950053 |
| C. grevilleae | CBS 132879* | KC297078 | KC297010 | KC296941 | KC297102 |
| C. hymenocallidicola | MFLUCC 12–0531* | KT290264 | KT290263 | – | – |
| C. jishouense | GZU_HJ2_G2 | MH482931 | MH681657 | MH708134 | MH727472 |
| C. jishouense | GZU_HJ2_G3 | MH482929 | MH681658 | MH708135 | MH727473 |
| C. jishouense | GZU_HJ2_G4 | MH482932 | MH681659 | MH708136 | MH727474 |
| C. jishouense | GZU_HJ3_J5 | MH482930 | MH492706 | MH708137 | – |
| C. kahawae | C1266.1 | JX010231 | JX010012 | JX009452 | JX010444 |
| C. ledebouriae | CPC 25671* | KX228254 | – | KX228357 | – |
| C. liaoningense | CAUOS2* | KP890104 | KP890135 | KP890097 | KP890111 |
| C. lindemuthianum | CBS 144.31* | JQ005779 | JX546712 | JQ005842 | JQ005863 |
| C. magnisporum | CBS 398.84 | KF687718 | KF687842 | KF687803 | KF687882 |
| C. malvarum | CBS 521.97* | KF178480 | KF178504 | KF178577 | KF178601 |
| C. neosansevieriae | CPC 25127* | KR476747 | KR476791 | KR476790 | KR476797 |
| C. nymphaeae | CBS 515.78 | JQ948197 | JQ948527 | JQ949518 | JQ949848 |
| C. orchidophilum | CBS 632.80* | JQ948151 | JQ948481 | JQ949472 | JQ949802 |
| C. pisicola | CBS 724.97* | KM105172 | KM105522 | KM105382 | KM105452 |
| C. pseudoacutatum | CBS 436.77* | JQ948480 | JQ948811 | JQ949801 | JQ950131 |
| C. pseudomajus | CBS 571.88 | KF687722 | KF687826 | KF687801 | KF687883 |
| C. radices | CBS 529.93 | KF687719 | KF687825 | KF687785 | KF687869 |
| C. rhombiforme | CBS 129953* | JQ948457 | JQ948788 | JQ949778 | JQ950108 |
| C. sansevieriae | MAFF 239721* | NR_152313 | – | – | – |
| C. spinosum | CBS 515.97* | KF178474 | KF178498 | KF178571 | KF178595 |
| C. tanaceti | CBS 132693* | JX218228 | JX218243 | JX218238 | JX218233 |
| C. trichellum | CBS 217.64* | GU227812 | GU228204 | GU227910 | GU228106 |
| C. tongrenense | GZU_TRJ1-37 | MH482933 | MH705332 | MH717074 | MH729805 |
| C. tropicicola | L58 | JN050240 | JN050229 | JN050218 | JN050246 |
| C. truncatum | CBS 151.35 | GU227862 | GU228254 | GU227960 | GU228156 |
| C. vietnamense | CBS 125478 | KF687721 | KF687832 | KF687792 | KF687877 |
| C. yunnanense | CBS 132135* | JX546804 | JX546706 | – | JX519248 |
| Monilochaetes infuscans | CBS 869.96 | JQ005780 | JX546612 | JQ005843 | JQ005864 |
Notes: New strains are in bold. * ex-type strains. a No data in GenBank. bBCC: BIOTEC Culture Collection, National Center for Genetic Engineering and Biotechnology (BIOTEC), Khlong Luang, Pathumthani, Thailand; CBS: Culture collection of the Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, Utrecht, The Netherlands; CGMCC: China General Microbiological Culture Collection; CPC: Working collection of Pedro W. Crous, housed at CBS; IMI: Culture collection of CABI Europe UK Centre, Egham, UK; LC: Working collection of Lei Cai, housed at CAS, China; MAFF: MAFF GenBank Project, Ministry of Agriculture, Forestry and Fisheries, Tsukuba, Japan; MFLUCC: Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; MFLU: Herbarium of Mae Fah Luang University, Chiang Rai, Thailand; ICMP: International Collection of Microorganisms from Plants, Auckland, New Zealand.