Table 1.
Wavenumber | VIP scores: clinical strains vs type 1 reference M129 | VIP scores: clinical strains vs type 2 reference FH | VIP scores: M129 vs III-4 |
VIP scores: M129 vs IV-22 | VIP scores: III-4 vs IV-22 |
Tentative bond vibrational mode assignments |
---|---|---|---|---|---|---|
1659–1675 | High | High | --- | --- | --- | 1675: Amide I a,b 1663, 1670, 1672: Amide I c |
1631–1647 | Low | Low | --- | --- | --- | 1646: Amide I a 1637: Amide I b, d |
1474–1485 | --- | --- | Low | Low | Low | --- |
1457–1467 | --- | --- | Low | Low | Low | 1440–1460: C-H2 def b, c |
1438–1451 | --- | --- | Low | High | Low | 1442–1443: CH2 scissoring a; 1440–1460: C-H2 def b, c ; 1347, 1350: CH2 bend (protein, lipid) d |
1395–1400 | High | High | --- | --- | --- | 1400: COO- symmetric stretching b |
1388–1394 | High | High | --- | --- | --- | 1392: COO- symmetric stretchinga |
1375–1381 | High | High | --- | --- | --- | C-H bend (protein) d |
1347–1352 | --- | --- | Low | --- | Low | 1350: Amide IIIb, Trpc |
1334–1341 | --- | --- | Low | --- | Low | 1335, 1338, 1339: Trp c
1337, 1341: C-H bend (protein) d |
1324–1330 | --- | --- | Low | --- | --- | 1330: Trpa; 1329: C-H bend (protein) d |
1262–1266 | Low | Low | --- | --- | --- | 1230–1295: Amide III b, c |
1051–1061 | --- | --- | High | High | High | 1061: Gln, C-N stretch b
1056: C-C stretch d |
1039–1050 | --- | --- | High | High | High | 1040: Phe c; 1043, C-C stretch d |
1006–1020 | Low | High | High | High | High | 1013,1019: Phea; 1009: Trpc |
997–1005 | Low | Low | High | High | High | 997: Phea;; 1004: Pheb; 1001–1003: Phe c |
960–971 | High | High | High | High | Low | 971: C-C stretch a ; 960: C-C stretch c; 961, 963, 966, 967: C-N stretch d |
947–957 | High | High | High | High | Low | --- |
933–943 | --- | --- | High | High | Low | 934: C-C stretch c, d |
923–931 | Low | Low | --- | High | Low | 924, 925, 931: C-COO- stretch d |
810–811 | --- | --- | --- | Low | Low | --- |
797–804 | --- | --- | High | High | --- | 801: -O-P-O d |
778–786 | --- | --- | Low | --- | Low | 785: Cytosine/Uracil stretchb |
766–770 | Low | Low | --- | --- | --- | --- |
738–744 | --- | --- | Low | Low | Low | 746: Trpa |
716–728 | Low | Low | High | High | Low | 720: C-H rocking; Adeb; 720–721: Trp c |
702–714 | Low | High | High | High | Low | --- |
581–583 | --- | Low | ||||
574–578 | --- | --- | Low | --- | Low | 575–577, 582:carbohydrated |
565–569 | --- | --- | Low | --- | --- | 568: Trp c |
505–513 | Low | Low | --- | --- | --- | 507–509, 513: S-S c |
498–500 | --- | --- | Low | --- | Low | |
472–480 | Low | Low | --- | --- | --- | --- |