Table 1.
MADS-box gene family identified in Brassica oleracea
| Gene name | Gene locus | Chr. no. | Protein | No. of introns | pI | Group | |
|---|---|---|---|---|---|---|---|
| Length/aa | Mol.wt./Kda | ||||||
|
BolMADS1
(BoFUL-a) |
Bol007763 | Scaffold256 | 241 | 27.41 | 7 | 9.36 | MIKCc |
|
BolMADS2
(BoFUL-b) |
Bol017059 | C07 | 241 | 27.52 | 7 | 9.46 | MIKCc |
|
BolMADS3
(BoFUL-c) |
Bol036265 | C09 | 241 | 27.43 | 7 | 9.31 | MIKCc |
| BolMADS4 | Bol029887 | C03 | 247 | 28.14 | 7 | 9.62 | MIKCc |
| BolMADS5 | Bol030482 | C09 | 253 | 28.83 | 6 | 8.56 | MIKCc |
| BolMADS6 | Bol041762 | C07 | 252 | 29.29 | 7 | 7.71 | MIKCc |
| BolMADS7 | Bol011058 | C04 | 259 | 29.14 | 7 | 5.49 | MIKCc |
| BolMADS8 | Bol024219 | Scaffold93_P1 | 240 | 27.42 | 6 | 7.14 | MIKCc |
| BolMADS9 | Bol020052 | C02 | 160 | 18.69 | 3 | 9.62 | MIKCc |
|
BolMADS10
(BoCAL) |
Bol024957 | C03 | 218 | 25.72 | 6 | 9.33 | MIKCc |
| BolMADS11 | Bol034251 | C03 | 263 | 29.87 | 7 | 8.90 | MIKCc |
| BolMADS12 | Bol029555 | C03 | 160 | 18.61 | 4 | 9.56 | MIKCc |
| BolMADS13 | Bol023763 | C06 | 248 | 28.41 | 6 | 9.11 | MIKCc |
| BolMADS14 | Bol004959 | C04 | 248 | 28.35 | 6 | 8.77 | MIKCc |
| BolMADS15 | Bol037657 | Scaffold24 | 221 | 24.97 | 7 | 6.78 | MIKCc |
| BolMADS16 | Bol033138 | C02 | 89 | 10.37 | 0 | 10.53 | MIKCc |
| BolMADS17 | Bol036252 | C09 | 245 | 29.04 | 5 | 6.57 | MIKCc |
| BolMADS18 | Bol017090 | C07 | 251 | 29.59 | 5 | 7.33 | MIKCc |
| BolMADS19 | Bol025193 | C08 | 232 | 27.27 | 6 | 8.71 | MIKCc |
| BolMADS20 | Bol032290 | C09 | 248 | 28.09 | 7 | 9.22 | MIKCc |
| BolMADS21 | Bol041644 | Scaffold9_P1 | 224 | 26.51 | 6 | 7.85 | MIKCc |
| BolMADS22 | Bol008758 | C03 | 216 | 24.28 | 5 | 9.10 | MIKCc |
| BolMADS23 | Bol043693 | C09 | 130 | 14.54 | 2 | 9.57 | MIKCc |
| BolMADS24 | Bol028071 | C03 | 202 | 23.16 | 6 | 9.36 | MIKCc |
| BolMADS25 | Bol003519 | Scaffold348 | 212 | 24.03 | 6 | 6.35 | MIKCc |
| BolMADS26 | Bol034952 | C02 | 211 | 23.90 | 6 | 7.66 | MIKCc |
| BolMADS27 | Bol002366 | Scaffold392 | 211 | 23.97 | 6 | 6.85 | MIKCc |
|
XP_013590290.1
a
(BoAP1-c) |
XP_013590290.1 | / | 256 | 30.13 | 7 | 8.31 | MIKCc |
|
XP_013589842.1
(BoAP1-a) |
XP_013589842.1 | / | 256 | 30.18 | 7 | 8.00 | MIKCc |
| XP_013600280.1 | XP_013600280.1 | / | 241 | 27.20 | 8 | 6.07 | MIKCc |
| XP_013631060.1 | XP_013631060.1 | / | 241 | 27.25 | 8 | 6.08 | MIKCc |
| XP_013597287.1 | XP_013597287.1 | / | 252 | 28.79 | 8 | 9.81 | MIKCc |
| XP_013626307.1 | XP_013626307.1 | / | 208 | 24.09 | 5 | 9.41 | MIKCc |
| XP_013607408.1 | XP_013607408.1 | / | 208 | 24.15 | 5 | 9.16 | MIKCc |
| XP_013630326.1 | XP_013630326.1 | / | 213 | 24.42 | 7 | 9.48 | MIKCc |
| XP_013632159.1 | XP_013632159.1 | / | 213 | 24.37 | 7 | 9.82 | MIKCc |
| BolMADS28 | Bol042006 | Scaffold8_P1 | 335 | 38.03 | 9 | 4.95 | MIKC* |
| BolMADS29 | Bol027523 | C06 | 329 | 37.65 | 9 | 5.03 | MIKC* |
| BolMADS30 | Bol013125 | C01 | 207 | 23.94 | 6 | 9.56 | MIKC* |
| BolMADS31 | Bol013192 | C08 | 338 | 38.88 | 10 | 6.09 | MIKC* |
| BolMADS32 | Bol007216 | C07 | 389 | 44.21 | 10 | 6.86 | MIKC* |
| BolMADS33 | Bol023922 | C06 | 406 | 46.31 | 8 | 5.80 | MIKC* |
| BolMADS34 | Bol008953 | C02 | 257 | 29.09 | 1 | 9.28 | Mα |
| BolMADS35 | Bol026349 | C06 | 213 | 24.22 | 0 | 5.48 | Mα |
| BolMADS36 | Bol037864 | C04 | 187 | 21.32 | 0 | 5.07 | Mα |
| BolMADS37 | Bol008951 | C02 | 123 | 14.29 | 0 | 9.90 | Mα |
| BolMADS38 | Bol008950 | C02 | 120 | 13.98 | 0 | 9.95 | Mα |
| BolMADS39 | Bol009782 | C08 | 206 | 23.45 | 0 | 9.37 | Mα |
| BolMADS40 | Bol031566 | C08 | 162 | 18.43 | 0 | 8.74 | Mα |
| BolMADS41 | Bol001956 | Scaffold412 | 176 | 20.03 | 0 | 6.98 | Mα |
| BolMADS42 | Bol033229 | C04 | 240 | 27.83 | 1 | 9.47 | Mα |
| BolMADS43 | Bol022502 | C05 | 171 | 19.07 | 0 | 5.4 | Mα |
| BolMADS44 | Bol019111 | Scaffold133 | 189 | 21.44 | 0 | 9.15 | Mα |
| BolMADS45 | Bol044870 | C06 | 256 | 28.53 | 0 | 4.43 | Mα |
| BolMADS46 | Bol015619 | C06 | 247 | 27.56 | 0 | 4.40 | Mα |
| BolMADS47 | Bol001334 | Scaffold454 | 193 | 22.36 | 0 | 9.03 | Mα |
| BolMADS48 | Bol023453 | C08 | 268 | 29.59 | 0 | 4.76 | Mα |
| BolMADS49 | Bol023443 | C08 | 268 | 29.58 | 0 | 4.76 | Mα |
| BolMADS50 | Bol023442 | C08 | 268 | 29.57 | 0 | 4.76 | Mα |
| BolMADS51 | Bol002451 | Scaffold388 | 364 | 40.07 | 0 | 4.51 | Mα |
| BolMADS52 | Bol014335 | C03 | 198 | 21.87 | 0 | 4.93 | Mα |
| BolMADS53 | Bol014328 | C03 | 247 | 27.44 | 0 | 5.17 | Mα |
| BolMADS54 | Bol001745 | Scaffold424 | 263 | 29.06 | 0 | 4.08 | Mα |
| BolMADS55 | Bol016615 | Scaffold153 | 325 | 36.41 | 0 | 4.28 | Mα |
| BolMADS56 | Bol016587 | Scaffold153 | 285 | 32.00 | 0 | 4.97 | Mα |
| BolMADS57 | Bol009950 | C04 | 359 | 39.83 | 0 | 4.39 | Mα |
| BolMADS58 | Bol009965 | C04 | 159 | 17.76 | 0 | 6.12 | Mα |
| BolMADS59 | Bol030956 | C01 | 344 | 39.50 | 0 | 8.33 | Mβ |
| BolMADS60 | Bol016846 | C09 | 301 | 35.04 | 0 | 8.66 | Mβ |
| BolMADS61 | Bol022880 | C03 | 127 | 14.73 | 0 | 8.42 | Mβ |
| BolMADS62 | Bol002990 | Scaffold367 | 356 | 40.68 | 0 | 8.83 | Mβ |
| BolMADS63 | Bol027893 | C03 | 274 | 31.42 | 0 | 8.44 | Mβ |
| BolMADS64 | Bol008049 | C02 | 342 | 39.28 | 0 | 9.46 | Mβ |
| BolMADS65 | Bol012873 | Scaffold192 | 324 | 37.21 | 0 | 5.69 | Mβ |
| BolMADS66 | Bol012871 | Scaffold192 | 305 | 35.22 | 0 | 6.45 | Mβ |
| BolMADS67 | Bol037792 | C04 | 82 | 9.52 | 1 | 5.23 | Mβ |
| BolMADS68 | Bol044867 | C06 | 250 | 28.54 | 0 | 6.96 | Mβ |
| BolMADS69 | Bol012124 | C04 | 178 | 20.55 | 0 | 9.58 | Mβ |
| BolMADS70 | Bol010353 | C05 | 345 | 39.35 | 0 | 7.14 | Mγ |
| BolMADS71 | Bol012341 | C07 | 157 | 18.42 | 0 | 9.85 | Mγ |
| BolMADS72 | Bol012715 | Scaffold194_P1 | 395 | 44.69 | 0 | 5.72 | Mγ |
| BolMADS73 | Bol012716 | Scaffold194_P1 | 395 | 44.64 | 0 | 5.54 | Mγ |
| BolMADS74 | Bol012712 | Scaffold194_P1 | 395 | 44.72 | 0 | 5.61 | Mγ |
| BolMADS75 | Bol023555 | Scaffold99_P1 | 162 | 18.89 | 0 | 9.8 | Mγ |
| BolMADS76 | Bol002873 | Scaffold372 | 334 | 36.96 | 0 | 8.3 | Mγ |
| BolMADS77 | Bol022282 | C07 | 375 | 42.74 | 0 | 5.25 | Mγ |
| BolMADS78 | Bol004579 | C02 | 308 | 35.23 | 1 | 8.73 | Mγ |
| BolMADS79 | Bol024509 | C02 | 252 | 28.89 | 0 | 5.43 | Mγ |
| BolMADS80 | Bol002483 | Scaffold387 | 344 | 39.14 | 1 | 5.65 | Mγ |
| BolMADS81 | Bol043965 | C09 | 191 | 21.98 | 0 | 5.05 | Mγ |
| BolMADS82 | Bol036538 | C01 | 278 | 32.27 | 1 | 4.95 | Mγ |
aThe genes of XP series were found in NCBI database, and there was no location information of B. oleracea genome