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. 2019 Mar 20;2019:baz022. doi: 10.1093/database/baz022

Table 1.

Fungal and yeast strain genomes in AYbRAH. Protein sequences were downloaded from UniProt or MycoCosm. Species were assigned to monophyletic or paraphyletic groups based on divergence time with S. cerevisiae

Species Strain Group Database Reference
Rhodotorula graminis WP1 Saccharomycotina outgroup MycoCosm (73)
Saitoella complicata NRRL Y-17804 MycoCosm (28)
Schizosaccharomyces pombe 972h- UniProt (74)
Aspergillus niger CBS 513.88 UniProt (75)
Neurospora crassa CBS708.71 UniProt (76)
Trichoderma reesei QM6a UniProt (77)
Lipomyces starkeyi NRRL Y-11557 basal Saccharomycotina MycoCosm (28)
Yarrowia lipolytica CLIB 122 UniProt (78)
Blastobotrys adeninivorans LS3 MycoCosm (79)
Nadsonia fulvescens var. elongata DSM 6959 MycoCosm (28)
Ascoidea rubescens NRRL Y17699 MycoCosm (28)
Pachysolen tannophilus NRRL Y-2460 Pichiaceae MycoCosm (28)
Komagataella phaffii GS115 UniProt (80)
Kuraishia capsulata CBS 1993 UniProt (81)
Ogataea arabinofermentans NRRL YB-2248 MycoCosm (28)
Ogataea parapolymorpha NRRL Y-7560 UniProt (83)
Dekkera bruxellensis CBS 2499 MycoCosm (82)
Pichia membranifaciens NRRL Y-2026 MycoCosm (28)
Pichia kudriavzevii SD108 UniProt (84)
Babjeviella inositovora NRRL Y-12698 CTG clade MycoCosm (28)
Metschnikowia bicuspidata NRRL YB-4993 MycoCosm (28)
Meyerozyma guilliermondii CBS 566 UniProt (85)
Debaryomyces hansenii CBS 767 UniProt (78)
Scheffersomyces stipitis CBS 6054 UniProt (86)
Spathaspora passalidarum NRRL Y-27907 UniProt (30)
Wickerhamomyces anomalus NRRL Y-366-8 Phaffomycetaceae & Saccharomycodaceae MycoCosm (28)
Cyberlindnera jadinii NRRL Y-1542 MycoCosm (28)
Hanseniaspora valbyensis NRRL Y-1626 MycoCosm (28)
Kluyveromyces lactis CBS 2359 Saccharomycetaceae UniProt (78)
Lachancea thermotolerans CBS 6340 UniProt (87)
Zygosaccharomyces rouxii CBS 732 UniProt (87)
Saccharomyces cerevisiae S288C UniProt (88)
Vanderwaltozyma polyspora DSM 70294 UniProt (89)