Table 4. Overlap between the DTU results from RATs, SUPPA2 and DRIM-Seq, for quantification of the Deng et al. (2013, 31) dataset based on Ensembl v87.
The overlaps are shown as the proportion of the results from the methods on the columns captured by the methods on the rows.
| Ensembl v60 | Ensembl v87 | Overlap
(v60 & v87) |
||||
|---|---|---|---|---|---|---|
| genes | transc | genes | transc | genes | transc | |
| RATs (genes) | 673 | - | 817 | - | 272 | - |
| RATs (transc.) | (553) | 772 | (652) | 833 | (213) | 223 |
| SUPPA2 | (780) | 1391 | (753) | 1252 | (257) | 374 |
| DRIM-Seq | 987 | - | 1680 | - | 541 | - |