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. 2019 Mar 20;9:28. doi: 10.1186/s13550-019-0500-2

Table 3.

Predicted upstream regulators affected in GOT1 tumors after 177Lu-octreotate therapy with priming

Upstream regulator z p Targets from transcriptional data
1 day
GDF15 6.1 × 10−6 ↑CDKN1A, ↑GDF15
PPP5C 1.8 × 10−5 ↑CDKN1A, ↑SGK
SATB1 0.11 7.8 × 10−5 ↑CDKN1A, ↑F5, ↑FAM129A, ↑SGK
RNF2 1.3 × 10−4 ↑CDKN1A, ↑GDF15
FH 2.2 × 10−4 ↑APOD, ↑CDKN1A
3 days
p53 3.3 6.0 × 10−14 ↑ACTA2, ↑APOE, ↑BAX, ↑CCND3, ↑CDKN1A, ↓CTGF, ↑DDB2, ↑DDIT3, ↓FDFT1, ↑GADD45A, ↑GDF15, ↑NINJ1, ↓PBK, ↑PHLDA3, ↑SPATA18, ↑TIGAR, ↑TNFRSF10B, ↑VCAN
ANXA2 −2.0 8.1 × 10−9 ↑BAX, ↑CDKN1A, ↑GADD45A, ↑TNFRSF10B, ↑ZMAT3
MYC −0.32 2.0 × 10−8 ↑BAX, ↑CCND3, ↑CDKN1A, ↑DDB2, ↑DDIT3, ↓EXOSC8, ↑GADD45A, ↑HSPH1, ↑TNFRSF10B
PPARGC1A 0.32 8.3 × 10−8 ↑BAX, ↑CDKN1A, ↓INSIG1, ↓LDLR, ↑TIGAR
KDM5B 2.6 2.0 × 10−5 ↑DDIT3, ↓DLGAP5, ↑GADD45A, ↓INSIG1, ↓PBK
7 days
PPARG 0.17 9.8 × 10−8 ↑ACTA2, ↑CDH1, ↑CDKN1A, ↑CTSL, ↓INSIG1, ↓PDK4
PARP1 −2.0 3.7 × 10−7 ↑CDH1, ↓PEG10, ↓TMSB15A, ↑TNFRSF10B
p53 1.9 1.0 × 10−6 ↑ACTA2, ↑APOE, ↑CDH1, ↑CDKN1A, ↑F5, ↓FDFT1, ↑GDF15, ↑NINJ1, ↓PEG10, ↑PHLDA3, ↓TMSB15A, ↑TNFRSF10B
SKI 1.1 × 10−6 ↑ACTA2, ↑CDH1, ↑CDKN1A
GDF15 1.5 × 10−5 ↑CDKN1A, ↑GDF15
41 days
LIN28B 4.5 × 10−5 ↓BCL11A, ↓SOX2
ID1 1.9 × 10−4 ↓EGR1, ↓SOX2
CDX2 1.1 × 10−3 ↓NR2F2, ↓SOX2
SHP 1.3 × 10−3 ↓EGR1
mir-140 1.3 × 10−3 ↓SOX2

Significantly affected upstream regulators identified with IPA (Fisher’s exact test, p < 0.05), ranked according to the lowest p value, for each time point. z scores indicate activation state of the upstream regulator; z > 2 indicates activation, and z < −2 indicates inhibition. Up and down arrows indicate upregulated and downregulated genes in tumor samples from treated animals compared with controls, respectively. ► indicates the upstream regulator was not affected in animals treated with 15 MBq single administration of 177Lu-octreotate (from GEO accession GSE80024)