Table 3.
Upstream regulator | z | p | Targets from transcriptional data | |
---|---|---|---|---|
1 day | ||||
GDF15 | – | 6.1 × 10−6 | ↑CDKN1A, ↑GDF15 | |
PPP5C | – | 1.8 × 10−5 | ↑CDKN1A, ↑SGK | |
SATB1 | 0.11 | 7.8 × 10−5 | ↑CDKN1A, ↑F5, ↑FAM129A, ↑SGK | |
RNF2 | – | 1.3 × 10−4 | ↑CDKN1A, ↑GDF15 | |
FH | – | 2.2 × 10−4 | ↑APOD, ↑CDKN1A | |
3 days | ||||
► | p53 | 3.3 | 6.0 × 10−14 | ↑ACTA2, ↑APOE, ↑BAX, ↑CCND3, ↑CDKN1A, ↓CTGF, ↑DDB2, ↑DDIT3, ↓FDFT1, ↑GADD45A, ↑GDF15, ↑NINJ1, ↓PBK, ↑PHLDA3, ↑SPATA18, ↑TIGAR, ↑TNFRSF10B, ↑VCAN |
► | ANXA2 | −2.0 | 8.1 × 10−9 | ↑BAX, ↑CDKN1A, ↑GADD45A, ↑TNFRSF10B, ↑ZMAT3 |
MYC | −0.32 | 2.0 × 10−8 | ↑BAX, ↑CCND3, ↑CDKN1A, ↑DDB2, ↑DDIT3, ↓EXOSC8, ↑GADD45A, ↑HSPH1, ↑TNFRSF10B | |
PPARGC1A | 0.32 | 8.3 × 10−8 | ↑BAX, ↑CDKN1A, ↓INSIG1, ↓LDLR, ↑TIGAR | |
► | KDM5B | 2.6 | 2.0 × 10−5 | ↑DDIT3, ↓DLGAP5, ↑GADD45A, ↓INSIG1, ↓PBK |
7 days | ||||
PPARG | 0.17 | 9.8 × 10−8 | ↑ACTA2, ↑CDH1, ↑CDKN1A, ↑CTSL, ↓INSIG1, ↓PDK4 | |
► | PARP1 | −2.0 | 3.7 × 10−7 | ↑CDH1, ↓PEG10, ↓TMSB15A, ↑TNFRSF10B |
p53 | 1.9 | 1.0 × 10−6 | ↑ACTA2, ↑APOE, ↑CDH1, ↑CDKN1A, ↑F5, ↓FDFT1, ↑GDF15, ↑NINJ1, ↓PEG10, ↑PHLDA3, ↓TMSB15A, ↑TNFRSF10B | |
SKI | – | 1.1 × 10−6 | ↑ACTA2, ↑CDH1, ↑CDKN1A | |
GDF15 | – | 1.5 × 10−5 | ↑CDKN1A, ↑GDF15 | |
41 days | ||||
► | LIN28B | – | 4.5 × 10−5 | ↓BCL11A, ↓SOX2 |
ID1 | – | 1.9 × 10−4 | ↓EGR1, ↓SOX2 | |
► | CDX2 | – | 1.1 × 10−3 | ↓NR2F2, ↓SOX2 |
SHP | – | 1.3 × 10−3 | ↓EGR1 | |
mir-140 | – | 1.3 × 10−3 | ↓SOX2 |
Significantly affected upstream regulators identified with IPA (Fisher’s exact test, p < 0.05), ranked according to the lowest p value, for each time point. z scores indicate activation state of the upstream regulator; z > 2 indicates activation, and z < −2 indicates inhibition. Up and down arrows indicate upregulated and downregulated genes in tumor samples from treated animals compared with controls, respectively. ► indicates the upstream regulator was not affected in animals treated with 15 MBq single administration of 177Lu-octreotate (from GEO accession GSE80024)