Table 1.
Bacterial taxa from guts of A. mali larvae identified by 16S rRNA high-throughput sequencing analysis.
| OTU | Phylum | Order | Family | Genus | Predicted species (GenBank #) | Abundance |
|---|---|---|---|---|---|---|
| 38 | Acidobacteria | JF986535* | 2 | |||
| 30 | GU015920* | 3 | ||||
| 9 | Actinobacteria | Propionibacteriales | Propionibacteriaceae | Propionibacterium |
P. acnes CP023676; R. erythropolis MH298510* |
26 |
| 19 | Actinomycetales | Nocardiaceae | Rhodococcus |
R. qingshengii MH064222*; R. degradans KY992558* |
12 | |
| 21 | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | Revotella sp. MG801743 | 14 |
| 14 | Bacteroidales | Rikenellaceae | Rikenella sp. | Rikenella sp. KC417282*** | 39 | |
| 26 | Bacteroidales | Porphyromonoadaceae | Odoribacter | Odoribacter MG052424* | 3 | |
| 11 | Firmicutes | Lactobacillales | Lactobacillaceae | Lactobacillus | L. johnsonii MH393024; | 23 |
| 20 | Lactobacillales | Lactobacillaceae | Lactobacillus | L. intestinalis LC096206* | 12 | |
| 23 | Clostridiales | MG802288 | 10 | |||
| 4 | Clostridiales | AB751303 | 156 | |||
| 31 | Clostridiales | Lachnospiraceae | FJ833589* | 8 | ||
| 37 | Oscillospirales | Ruminococcaceae | AB700360* | 7 | ||
| 15 | Oscillospirales | Ruminococcaceae | KY664658* | 19 | ||
| 25 | Oscillospirales | Ruminococcaceae | Negativibacillus | N. massiliensis NR_147378** | 2 | |
| 39 | Proteobacteria | Burkholderiales | Sutterellaceae | Sutterella | Sutterella sp. KX833879 | 8 |
| 13 | Desulfovibrionales | Desulfovibrionaceae | Bilophila | Bilophila sp. KP055112 | 6 | |
| 12 | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. KF760539* | 47 | |
| 3 | Campylobacterales | Campylobacteraceae | Arcobacter | Arcobacter sp. FN397894 | 466 | |
| 10 | Campylobacterales | Helicobacteraceae | Helicobacter |
H. typhlonius NR_041748; H. apri KP120975*; H. mastomyrinus NR_115314*; H. japonicas NR_149210* |
12 | |
| 5 | Pseudomonadales | Moraxellaceae | Acinetobacter |
A. nosocomialis CP029351; A. pittii KY941128; A. calcoaceticus MF149066 |
113 | |
| 24 | Enterobacteriales | Enterobacteriaceae | Erwinia | Erwinia sp. MF525796* | 254 | |
| 22 | Enterobacteriales | Enterobacteriaceae | Erwinia | E. tasmaniensis KF574916* | 16 | |
| 17 | Enterobacteriales | Enterobacteriaceae | Escherichia | E. coli CP008805 | 7 | |
| 1 | Enterobacteriales | Enterobacteriaceae | Pantoea | P. agglomerans MH158658 | 77651 | |
| 18 | Enterobacteriales | Enterobacteriaceae | Pantoea | P. agglomerans KT075213* | 35003 | |
| 8 | Enterobacteriales | Enterobacteriaceae | Pantoea |
P. vagans MH211327*; P. agglomerans MH190052 |
24347 | |
| 32 | Enterobacteriales | Enterobacteriaceae | Pantoea |
P. agglomerans MH165381*; P. vagans MG819435* |
1646 | |
| 2 | Pseudomonadales | Pseudomonadaceae | Pseudomonas |
Ps. congelans LT547855; Ps. syringae KR922152; Ps. cannabina JN167950; Ps. viridiflava HE588020 |
2 | |
| 7 | Pseudomonadales | Pseudomonadaceae | Pseudomonas |
Ps. gessardii MH398505; Ps. reactans MH396741; Ps. synxantha CP011117; Ps. brenneri MF509842; Ps. azotoformans KY939740; Ps. libanensis KY939752; Ps. fluorescens MG977684; Ps. paralactis MG952589 |
101 | |
| 33 | Pseudomonadales | Pseudomonadaceae | Stenotrophomonas |
S. pavanii MF375923; S. maltophilia MH396764 |
2 | |
| 6 | Vibrionales | Vibrionaceae | Vibrio |
V. scophthalmi MG456764*; V. ichthyoenteri KJ817452* |
108 | |
| 28 | Vibrionales | Vibrionaceae | Vibrio |
V. azureus CP018617*; V. ichthyoenteri NR_117888*; V. comitans KT023539*; V. furnissii KR270195*; V. ponticus KF193915 |
13 | |
| 29 | Spirochaetes | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta sp. DQ340184** | 12 |
| 27 | Spirochaetales | Spirochaetaceae | Spirochaeta sp. DQ340184*** | 23 | ||
| 36 | Unknown | Uncultured bacterium MF259861 | 5 | |||
| 35 | Unknown | Uncultured bacterium MF081102 | 4 | |||
| 34 | Unknown | Uncultured bacterium MF260097 |
*Similarity between 97% < 100%; **similarity between 95% < 97%; less than 95% similarity.