Table 2.
Chr. | L1-L2 (IF) | L2-L3 (IF) | L1-L2 (Euclidean distance in models) | L2-L3 (Euclidean distance in models) |
---|---|---|---|---|
11 | 2.496299 | 0.815569 | 10.52133 | 47.190198 |
13 | 2.156871 | 0.924415 | 19.49644 | 121.037814 |
14 | 2.065476 | 0.892723 | 13.85555 | 43.714938 |
The genomic positions of three probes (L1, L2, and L3) on the four loops of chromosomes 11, 13, and 14, and the distances between these probes in the high-resolution 1 KB models. Columns 2 and 3 report the IF between the three probes from the Hi-C data, columns 4 and 5 report the distances between the three probes from the models. Distances in the models are consistent with IFs in Hi-C data, but they are not small enough to appear like loops.