| VDW | Van der Waals |
| Å | Angstrom |
| RMSF | Root-Mean-Square Fluctuation |
| PBE | Poisson-Boltzmann equation |
| MM/GB | Molecular Mechanics Generalized Born |
| MT | Microtubule |
| RMSD | Root-Mean-Square Deviation |
| PDB | Protein Data Bank |
| MD | Molecular Dynamics |
| E-hook | Intrinsic disordered region in C-terminal domain of tubulins |
| MTBD | Microtubule Binding Domain |
| ATP | Adenosine Triphosphate |
| KT/e | KT/e is electrostatic potential unit. |
| Ns | Nano second |
| Elect | Electrostatics |
| VMD | Visual Molecular Dynamics |
| NMR | Nuclear Magnetic Resonance |
| NAMD | Nanoscale Molecular dynamics |
| CHARMM | Chemistry at Harvard Macromolecular Mechanics |