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. 2019 Mar 21;93(7):e02183-18. doi: 10.1128/JVI.02183-18

TABLE 2.

Primers and probes for ddPCR

Primer or probe Sequence (5′ to 3′)a
Forward primer for probes 1 and 2 AGCCACCGGTAAAGTAGGAC
Reverse primer for probes 1 and 2 GATGTGACCTTGGCGATGAC
Probe 1 FAM-CATGTCGCCGACTCCGTCGA-BHQ1
Probe 2 HEX-TGCTGGCAGCCCGGATG-BHQ1
Forward primer for probe 3 GTGTTGTGGCCTAGCTTTCG
Reverse primer for probe 3 CGCGAATACCGCTATGTACTC
Probe 3 HEX- TCTATCTGTCTGTAAGGGACCGGTGG-BHQ1
Forward primer for probe 4 CGAATCCAACGGATTTGACCTC
Reverse primer for probe 4 CCCATAAATGACACATTGGTGGTA
Probe 4 FAM-CCCATGGTCGTGCCGCAGCA-BHQ1
Forward primer for monkey β-globin probe CTAGCAACCTCAGACACCATGG
Reverse primer for monkey and human β-globin probes TCCACGTTCACCTTGCCC
Monkey β-globin probe HEX-CTCCTGAGGAGAAGACTGCCGTTACCACC-BHQ1
Forward primer for human β-globin probe CAACCTCAAACAGACACCATGG
Human β-globin probe HEX-CTCCTGAGGAGAAGTCTGCCGTTACTGCC-BHQ1
a

FAM, 6-carboxyfluorescein; BHQ1, black hole quencher 1; HEX, hexagonal peroxisome.