Table 4.
Putative candidate genes residing close vicinity (25 Kb either side) to associated SNPs.
| Trait | Associated SNP | Transcript | Start | End | Strand | Descriptiona |
|---|---|---|---|---|---|---|
| FLW | C9.37225457 | Seita.9G323400.1 | 37216841 | 37217637 | + | — |
| Seita.9G323300.1 | 37206818 | 37208370 | + | AP2 domain (AP2) | ||
| Seita.9G323200.1 | 37197886 | 37201790 | − | 8-amino-7-oxononanoate synthase | ||
| C9.37443288 | Seita.9G323700.1 | 37427089 | 37428983 | + | Protein of unknown function | |
| Seita.9G323800.1 | 37438152 | 37439633 | − | Ancient ubiquitous protein | ||
| Seita.9G323900.1 | 37444252 | 37445177 | − | — | ||
| Seita.9G324000.1 | 37445345 | 37446088 | − | Ulp1 peptidase/protease | ||
| C9.38068016 | Seita.9G327100.1 | 38052985 | 38054536 | + | Pollen allergen 1/DPBB_1 | |
| Seita.9G327200.1 | 38083746 | 38088203 | + | Arabinonate dehydratase/hydro-lyase | ||
| GY | C3.50114070 | Seita.3G401100.1 | 50096532 | 50101244 | − | RBR family ring finger and IBR domain-containing |
| Seita.3G401200.1 | 50109418 | 50111773 | + | — | ||
| Seita.3G401300.1 | 50115178 | 50119847 | + | Translation initiation factor IF-3 | ||
| Seita.3G401400.1 | 50120425 | 50125567 | − | Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 | ||
| Seita.3G401500.1 | 50128614 | 50130162 | + | RNA recognition motif | ||
| Seita.3G401600.1 | 50129252 | 50133460 | − | ADP-ribosylation factor-like protein 2 | ||
| C7.19705515 | Seita.7G094000.1 | 19688870 | 19690228 | − | Late embryogenesis abundant protein 2 | |
| Seita.7G094100.1 | 19693214 | 19697416 | + | Glycosyltransferase | ||
| Seita.7G094200.1 | 19701121 | 19703506 | − | Aluminum-activated malate transporter 8 | ||
| Seita.7G094300.1 | 19728010 | 19729582 | − | WDSAM1 protein | ||
| TGW | C9.37011889 | Seita.9G321400.1 | 36991641 | 36994547 | + | Sentrin/sumo-specific protease |
| Seita.9G321500.1 | 36997661 | 37000034 | − | HD-ZIP protein N terminus | ||
| Seita.9G321600.1 | 37005554 | 37011470 | − | U-box domain-containing protein 35-related | ||
| Seita.9G321700.1 | 37016333 | 37018688 | − | Ulp1 peptidase/Ulp1 protease | ||
| C6.34654923 | Seita.6G234400.1 | 34633343 | 34633845 | − | DNA polymerase delta subunit 4 | |
| Seita.6G234500.1 | 34641134 | 34645923 | + | — | ||
| Seita.6G234600.1 | 34655584 | 34665499 | + | ATP-binding cassette transporter | ||
| Seita.6G234700.1 | 34677410 | 34679017 | + | — |
a‘—’represents no annotation available.