Fig. 2.

—AI-based HGT detection method for detecting HGT candidates. (A) Simplified phylogenies of ingroup and outgroup. In AI-A setting, ingroup and outgroup species are non-Verticillium fungal species and nonfungal species, respectively. In AI-B setting, ingroup and outgroup species are nonascomycete fungal species and nonfungal species, respectively. (B) Distribution of AI sores. AI scores from two settings were calculated for every gene in the genome of Verticillium dahliae strain JR2 and they were ordered by decreasing AI score. (C) Numbers of genes with AI positive scores from two different settings.