Table 1.
Bacterial species used as references for AB-R-screening, biofilm formation, plasmid isolation, and in biparental mating.
| Species | Genotype/Characteristics | References |
|---|---|---|
| Bacillus subtilis | ||
| BD662 | pBD90 [ermD]; trpC2, thr-5 | Schiwon et al., 2013 |
| BD1156 | pBD370 [ermG]; leu, mer, hisH | Schiwon et al., 2013 |
| Enterobacter cloacae DSM46348 | ampC | Schiwon et al., 2013 |
| Enterococcus casseliflavus UC73 | aph(2)-Id, vanC | Schiwon et al., 2013 |
| Enterococcus gallinarum SF9117 | aph(2)-Ic, vanC, ermB | Schiwon et al., 2013 |
| Enterococcus faecalis | ||
| DS16 | tetM; pAD1, pAD2 | Schiwon et al., 2013 |
| RE25 | pRE25 [ermB, catpIP501, aph(3)-III, sat4, ant(6)-Ia, tra+], tetM | Schiwon et al., 2013 |
| JH2-2 | pIP501 [catpIP501, ermB, tra+] | Schiwon et al., 2013 |
| T9 | clinical isolate, TetR, strong biofilm former | Creti et al., 2006 |
| OG1X | StrepR, GentR, protease-negative | Schiwon et al., 2013 |
| MISSEX 78 | prepSK41, aph3-III, ermB, ermD, tetM, catpIP501 | |
| TU-79 | aph3-III, ermB, tetM, tetO, catpIP501, prepSK41 | Schiwon et al., 2013 |
| Enterococcus faecium | ||
| SF11770 | aac(6)-Im, aph(2)-Ib, aac(6)-Ii, ant(4)-Ia, ant(6)-Ia, aph(3)-III, ermB, sat4, tetL, tetM, vanA, vanZ | Schiwon et al., 2013 |
| Escherichia coli | ||
| PS84 | qnrS, sul2 | Broszat et al., 2014 |
| Hm06-20 | qnrA, sul1 | Broszat et al., 2014 |
| Lactococcus lactis K214 | pK214 [tetS, catLM, mdt(A), str, mob+] | DSMZ |
| Klebsiella pneumoniae | ||
| K2-78 | qnrB | Broszat et al., 2014 |
| DSM 16609 | blaSHV-5 | Broszat et al., 2014 |
| Staphylococcus aureus | ||
| SK5428 | pSK41 [ant(4)-Ia (synonym: aadD), aac(6)-Ie-aph(2)-Ia, ble, qacC, tra+] | Schiwon et al., 2013 |
| DSM13661 | mecA | Schiwon et al., 2013 |
| 04-02981 | strong biofilm former, methicillin resistant, ermA | Nuebel et al., 2010 |
| Staphylococcus epidermidis MISSEX 66 | prepSK41, aph3-III | Schiwon et al., 2013 |
| Staphylococcus haemolyticus VPS617 | tetK, mph(C), ermC, msr, blaZ, mecA, dfrA, aph(3)-III, aph(2)-Ia, aac(6)-Ie, ant(6)-IaInorA, sat4 | Schiwon et al., 2013 |
DSMZ, German collection of microorganisms and cell cultures, Braunschweig. AB-R, antibiotic resistance; StrepR, streptomycin resistance; TetR, tetracycline resistance; GentR, gentamicin resistance; AB-R genes for resistance against ampicillin, ampC (E. cloacae DSM46348), ciprofloxacin, qnrA (E. coli Hm06-20), qnrB (K. pneumoniae K2-78), qnrS (E. coli PS84); erythromycin, ermA (S. aureus 04-02981), ermB (E. faecium SF11770), ermC (S. haemolyticus VPS617), ermD (B. subtilis BD662), ermG (B. subtilis BD1156); gentamicin, aac(6′)-Ie-aph(2′)-Ia (E. faecium SF11770), aph(2′)-ib (E. faecium SF11770), aph(2′)-ic (E. gallinarum SF9117), aph(2′)-id (E. casseliflavus UC73); kanamycin, aadD [S. aureus SK5428 (pSK41)], aph(3′)-III (E. faecalis RE25) against oxacillin, mecA (S. aureus DSM13661); ß-lactams, blaSHV-5 (K. pneumoniae DSM13661), blaZ (S. haemolyticus VPS617); sulfamethoxazole, sul1 (E. coli Hm06-20), sul2 (E. coli PS84), and tetracycline, tetK (S. haemolyticus VPS617), tetL (E. faecium SF11770), tetM (E. faecium SF11770), tetO (E. faecalis TU-79), tetS (L. lactis K214).