REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Chemicals, Peptides, and Recombinant Proteins | ||
ATP-γ-S, Lithium salt | Roche | Cat.# 11162306001 |
ATP, [γ−32P] | Perkin Elmer | Cat.# NEG002A250U |
Critical Commercial Assays | ||
Dual-Luciferase Reporter Assay system | Promega | Cat.# E1980 |
QuikChange II XL Site-Directed Mutagenesis Kit | Agilent | Cat.# 200522 |
Deposited Data | ||
Raw Imaging Data | This Paper | http://dx.doi.org/10.17632/7psjn7wrfp.1 |
Experimental Models: Cell Lines | ||
HEK293T Cell Line | Dr. Marcotrigiano | Devarkar et al., PNAS 2016 |
Oligonucleotides | ||
5′ppp ss27 RNA 5′-pppAUACGUCCUGAUAGUUAGUAUCCAUCG-3′ |
Biosynthesis | N/A |
5′OH ss27 RNA 5′-AUACGUCCUGAUAGUUAGUAUCCAUCG-3′ |
Dharmacon | N/A |
5′OH ss25 RNA (for 3′ovg) 5′-ACGUCCUGAUAGUUAGUAUCCAUCG-3′ |
Dharmacon | N/A |
complementary ss27 RNA 5′Bi-CGAUGGAUACUAACUAUCAGGACGUAU-3′ DY547 |
Dharmacon | N/A |
5′ppp ss27 methylated RNA 5′-pppAUACGUCCUGAUAGUmUmAmGmUmAUCCAUCG-3′ |
Biosynthesis | N/A |
complementary ss27 methylated RNA 5′Bi-CGAUGGAmUmAmCmUmAACUAUCAGGACGUAU-3′ DY547 |
Dharmacon | N/A |
ss26 RNA chi (for stem dsRNA) 5′-dAdTdAdCdGUCCUGAUAGUUAGUAUCdCdAdTdC-3′ |
Dharmacon | N/A |
complementary ss26 RNA chi intCy3 (for stem dsRNA) 5′-dCdGdAdTdGGAUACUAAC(Cy3)UAUCAGGAdCdGdTdA-3′ |
T riLink | N/A |
complementary ss30 RNA chi (intCy3 at 13/17/20/24 nt from 3′
end) (for stopped-flow translocation assays) 5′Bi-dGdCdTCGAUGGAUACUAACUAUCAGGACGUAU-3′ |
T riLink | N/A |
Recombinant DNA | ||
pET28b 6xHis-SUMO-RIG-I | Jiang, et al. 2011 | N/A |
pET28b 6xHis-SUMO-HelRD | Jiang, et al. 2011 | N/A |
pET28b 6xHis SUMO-T667/671E RIG-I | This paper | N/A |
pET28b 6xHis-SUMO-Δ673–685 | Devarkar, et al. 2016 | N/A |
pET28b 6xHis-SUMO-C268F | This paper | N/A |
pET28b 6xH is-SUMO-E373A | This paper | N/A |
pcDNA 3.1 wt RIG-I | Devarkar, et al. 2016 | N/A |
pcDNA 3.1 empty vector | Devarkar, et al. 2016 | N/A |
pcDNA 3.1 E373A RIG-I | This paper | N/A |
pcDNA 3.1 C268F RIG-I | This paper | N/A |
pRL-TK (Renilla luciferase plasmid) | Devarkar, et al. 2016 | N/A |
pLuc125 (Firefly luciferase plasmid) | Devarkar, et al. 2016 | N/A |
Software and Algorithms | ||
Kintek Explorer Enzyme Kinetics Software | Kintek | https://www.kintekexplorer.com |
Other | ||
TLC PEI Cellulose F | Millipore | Cat.# 105579 |