Table 2.
List of Xylella fastidiosa strains sequenced for this study and genome properties
| Strain | Accession | Nb of readsa | Cover.b | Assemby size (bp) | Nb contigsc | N50 | Mean size (bp) | Largest (bp) | GC % |
|---|---|---|---|---|---|---|---|---|---|
| CFBP 7969 | PHFQ00000000 | 7,952,452 | 957x | 2,436,752 | 89 | 116,341 | 27,379 | 445,308 | 51.48 |
| CFBP 7970 | PHFR00000000 | 8,041,300 | 968x | 2,493,794 | 93 | 104,928 | 26,815 | 258,911 | 51.45 |
| CFBP 8071 | PHFP00000000 | 7,606,748 | 916x | 2,489,737 | 101 | 104,990 | 24,651 | 297,538 | 51.48 |
| CFBP 8082 | PHFT00000000 | 7,610,344 | 916x | 2,532,132 | 118 | 104,927 | 21,459 | 301,313 | 51.51 |
| CFBP 8351 | PHFU00000000 | 8,741,758 | 1053x | 2,479,202 | 93 | 104,608 | 26,658 | 266,361 | 51.45 |
| CFBP 8078 | PHFS00000000 | 8,807,962 | 1060x | 2,602,010 | 191 | 87,559 | 13,623 | 204,167 | 51.67 |
| CFBP 8356 | PHFV00000000 | 8,088,406 | 974x | 2,541,621 | 197 | 93,086 | 12,902 | 190,454 | 51.58 |
apair-end (301 bp)
bCoverage calculated for a mean genome of 2.5 Mb
cLarger than 500 bp