Table 4.
Nucleotide and gene count levels of the genomes
| P. raoultii | P. vaginalis | P. vaginalis | ||||
|---|---|---|---|---|---|---|
| Attribute | Value | % of totala | Value | % of totala | Value | % of totala |
| Size (bp) | 1,623,601 | 100% | 1,877,211 | 100% | 1,851,572 | 100% |
| G+C content (bp) | 517,506 | 31.87% | 642,534 | 34.22% | 914,357 | 49.38% |
| Coding region (bp) | 1,467,557 | 90.39% | 1,692,527 | 90.16 | 3,579,496 | 85.07% |
| Total genes | 1,624 | 100% | 1,780 | 100% | 1,801 | 100% |
| RNA genes | 42 | 2.59% | 40 | 2.35% | 54 | 3.00% |
| Protein‐coding genes | 1,520 | 93.60% | 1,698 | 95.39% | 1,699 | 94.34% |
| Genes with function prediction | 1,222 | 75.25% | 1,375 | 77.24% | 1,323 | 73.45% |
| Genes assigned to COGs | 1,048 | 65.53% | 1,204 | 67.64% | 1,175 | 65.24% |
| Genes with peptide signals | 162 | 9.97% | 169 | 9.49% | 231 | 12.83% |
| Genes with transmembrane helices | 349 | 21.49% | 403 | 22.64% | 414 | 22.98% |
a
The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.