Table 2.
Uniquely expressed transcripts in shoot and root of aerobic adapted cultivar CR Dhan 202 underlying QTLs for root related traits and water deficit tolerance.
| DETs | Description | Start (bp) | End (bp) | QTLs | Start (bp) | End (bp) |
|---|---|---|---|---|---|---|
| (a) In shoot (CAS) | ||||||
| Os05G0423400 | MADS box transcription factor 4 | 20327992 | 20334833 | brt1d | 14045859 | 42715593 |
| (b) In root (CAR) | ||||||
| Os01G0307500 | Cation transporter HKT8 | 11458956 | 11463442 | rfw1b | 7476658 | 35715948 |
| Os01G0723800 | MDR like ABC transporter | 30189384 | 30195340 | rfw1b | 7476658 | 35715948 |
| Os01G0723800 | MDR like ABC transporter | 30189384 | 30195340 | brt1d | 14045859 | 42715593 |
| Os04G0538400 | Vacuolar iron transporter homolog 2 | 26931464 | 26932639 | rfw4a | 25626203 | 33083265 |
| Os05G0566400 | Mitogen-activated protein kinase 7 | 28188894 | 28194022 | qRDW5-1 | 27056983 | 28855659 |
brt- basal root thickness; rfw- root fresh weight; rdw- root dry weight.