TABLE 3.
Proteins related to RNA metabolism identified in EV preparations from H. capsulatum strain G217B
| Majority protein ID | Protein name | Gene name |
|---|---|---|
| C0NMG7 | QDE2 protein | HCBG_03944 |
| C0P170 | Cap binding protein | HCBG_09150 |
| C0NJ23 | Exosome complex exonuclease RRP4 | HCBG_03153 |
| C0NM03 | Exosome complex exonuclease RRP45 | HCBG_04533 |
| C0NCT3 | KH domain RNA-binding protein | HCBG_00929 |
| C0NUH0 | KH domain RNA-binding protein | HCBG_07001 |
| C0NIU5 | KH domain-containing protein | HCBG_02352 |
| C0NUS5 | mRNA 3′-end-processing protein RNA14 | HCBG_06689 |
| C0NNW0 | mRNA cleavage and polyadenylation factor CLP1 | CLP1 HCBG_04840 |
| C0NP91 | mRNA decapping enzyme | HCBG_04971 |
| C0NC87 | mRNA export factor Mex67 | HCBG_00733 |
| C0NJ33 | Nuclear and cytoplasmic polyadenylated RNA-binding protein Pub1 | HCBG_03163 |
| C0NQQ9 | Poly(A)+ RNA export protein | HCBG_05339 |
| C0NSS5 | Polyadenylate-binding protein (PABP) | HCBG_06205 |
| C0NKR4 | Ribonucleoprotein | HCBG_03744 |
| C0NSY4 | RNA binding domain-containing protein | HCBG_06264 |
| C0NWH9 | RNA-binding protein | HCBG_07509 |
| C0NB22 | RNA-binding protein | HCBG_00318 |
| C0NPA1 | RNA-binding protein Nrd1 | HCBG_04981 |
| C0NZI9 | RNA-binding protein Prp24 | HCBG_08569 |
| C0NTZ5 | RNA-binding protein Snd1 | HCBG_06625 |
| C0NMQ0 | RNP domain-containing protein | HCBG_04027 |
| C0NLQ4 | RRM domain-containing protein | HCBG_04434 |
| C0NJ27 | Transcription elongation factor Spt6 | HCBG_03157 |
| C0NTQ1 | Transcription initiation factor TFIID complex 60-kDa subunit | HCBG_06531 |
| C0NRU6 | U1 snRNP-associated protein Usp106 | HCBG_05876 |
| C0NZZ2 | U1 snRNP-associated protein Usp107 | HCBG_08722 |
| C0NBS3 | U2 snRNP auxiliary factor large subunit | HCBG_00569 |
| C0NAD4 | U3 small nucleolar RNA-associated protein | HCBG_00080 |
| C0NZA3 | U3 small nucleolar RNA-associated protein 22 | HCBG_08483 |
| C0NLW4 | U3 snoRNP-associated protein Rrp5 | HCBG_04494 |
| C0P0R0 | U6 snRNA-associated Sm-like protein LSm2 | HCBG_08990 |
| C0P041 | 30S ribosomal protein S10 | HCBG_08883 |
| C0NFV8 | 40S ribosomal protein S15 | HCBG_01774 |
| C0NX47 | 40S ribosomal protein S18 | HCBG_08039 |
| C0NZD2 | 40S ribosomal protein S20 | HCBG_08512 |
| C0NBD0 | 40S ribosomal protein S21 | HCBG_00426 |
| C0NUD0 | 40S ribosomal protein S3 | HCBG_06961 |
| C0NLP3 | 40S ribosomal protein S4 | HCBG_04423 |
| C0NF40 | 40S ribosomal protein S5A | HCBG_01506 |
| C0NLR5 | 40S ribosomal protein S9 | HCBG_04445 |
| C0NTH6 | 5′–3′ exoribonuclease 1 (EC 3.1.13.-) | HCBG_06456 |
| C0NKI2 | 60S ribosomal protein L1 | HCBG_03662 |
| C0NNL2 | 60S ribosomal protein L3 | HCBG_04742 |
| C0NCP3 | 60S ribosomal protein L30 | HCBG_00889 |
| C0NRD6 | 60S ribosomal protein L5 | HCBG_05566 |
| C0NQR6 | 60S ribosomal protein L9B | HCBG_05346 |
| C0NPC0 | Acyl-RNA-complex subunit | HCBG_05000 |
| C0NKL8 | Alanine-tRNA ligase (EC 6.1.1.7) (alanyl-tRNA synthetase) (AlaRS) | ALA1 HCBG_03698 |
| C0NCS0 | Alternative oxidase (EC 1.-.-.-) | HCBG_00916 |
| C0ND66 | Arginyl-tRNA synthetase | HCBG_01062 |
| C0NT82 | Asparagine-rich protein | HCBG_06362 |
| C0NP94 | Asparaginyl-tRNA synthetase | HCBG_04974 |
| C0NGY7 | Aspartyl-tRNA synthetase | HCBG_02609 |
| C0NNJ3 | ATP-dependent helicase NAM7 | HCBG_04723 |
| C0NIT7 | ATP-dependent RNA helicase DOB1 | HCBG_02344 |
| C0NAN2 | ATP-dependent RNA helicase EIF4A | HCBG_00178 |
| C0NFC7 | Cell cycle control protein | HCBG_01593 |
| C0NT49 | Cleavage and polyadenylation specific factor 5 | HCBG_06329 |
| C0NW18 | Clustered mitochondria protein homolog (protein TIF31 homolog) | CLU1 TIF31 HCBG_07348 |
| C0NTW5 | Cysteinyl-tRNA synthetase | HCBG_06595 |
| C0NZE4 | d-Aminoacyl-tRNA deacylase (EC 3.1.1.-) (EC 3.1.1.96) | HCBG_08524 |
| C0NSH0 | DNA-directed RNA polymerase II polypeptide | HCBG_06100 |
| C0NB61 | DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) | HCBG_00357 |
| C0NKS3 | Elicitor protein | HCBG_03753 |
| C0NRY6 | Eukaryotic peptide chain release factor GTP-binding subunit | HCBG_05916 |
| C0P0 × 7 | Eukaryotic translation initiation factor 3 subunit D (EIF3D) | HCBG_09057 |
| C0NEV9 | Fibrillarin | HCBG_01425 |
| C0NZT8 | Glutaminyl-tRNA synthetase | HCBG_08668 |
| C0NKS5 | Glutamyl-tRNA synthetase | HCBG_03755 |
| C0NE28 | Glycyl-tRNA synthetase | HCBG_02121 |
| C0NN35 | Histidyl-tRNA synthetase | HCBG_04162 |
| C0NL66 | Isoleucyl-tRNA synthetase, cytoplasmic | HCBG_03896 |
| C0NZR4 | Leucyl-tRNA synthetase | HCBG_08644 |
| C0NH95 | Leucyl-tRNA synthetase | HCBG_02717 |
| C0NI62 | Lysine-tRNA ligase (EC 6.1.1.6) (lysyl-tRNA synthetase) | HCBG_03034 |
| C0NMS8 | Mitotic control protein dis3 | HCBG_04055 |
| C0NBJ8 | mRNA splicing protein PRP8 | HCBG_00494 |
| C0NY83 | NAM9+ protein | HCBG_07877 |
| C0NG69 | Nucleic acid-binding protein | HCBG_01885 |
| C0NUD1 | Phenylalanyl-tRNA synthetase subunit beta | HCBG_06962 |
| C0NBD1 | Phenylalanyl-tRNA synthetase subunit beta cytoplasmic | HCBG_00427 |
| C0NUP1 | Polymerase II polypeptide D | HCBG_06655 |
| C0NNC4 | Pre-mRNA-processing factor 39 | HCBG_04251 |
| C0NJB4 | Pre-mRNA-processing protein prp40 | HCBG_03244 |
| C0NXM8 | Pre-mRNA-splicing factor | HCBG_08220 |
| C0NLW7 | Prolyl-tRNA synthetase | HCBG_04497 |
| C0NW72 | Ribonuclease T2-like protein | HCBG_07402 |
| C0NEF9 | Ribonuclease Z | HCBG_01275 |
| C0NIJ3 | Ribosomal biogenesis protein Gar2 | HCBG_02250 |
| C0NHN4 | Ribosomal protein L14 | HCBG_02856 |
| C0NI43 | Ribosomal protein L6 | HCBG_03015 |
| C0NVX9 | Ribosomal protein S5 | HCBG_07309 |
| C0NN82 | RNA helicase (EC 3.6.4.13) | HCBG_04209 |
| C0NEY2 | RNA polymerase II largest subunit | HCBG_01448 |
| C0NL28 | RNA polymerase subunit | HCBG_03858 |
| C0NYA7 | RNase H domain-containing protein | HCBG_07901 |
| C0NH14 | RNP domain-containing protein | HCBG_02636 |
| C0NDP9 | RNP domain-containing protein | HCBG_01992 |
| C0NC99 | SAM domain-containing protein | HCBG_00745 |
| C0NE91 | Seryl-tRNA synthetase | HCBG_02184 |
| C0NSR2 | Signal recognition particle subunit SRP68 (SRP68) | HCBG_06192 |
| C0NDB1 | Small nuclear ribonucleoprotein | HCBG_01107 |
| C0NTA0 | Splicing factor 3A subunit 3 | HCBG_06380 |
| C0NUB9 | Splicing factor 3B | HCBG_06950 |
| C0NBR2 | Splicing factor 3B subunit 1 | HCBG_00558 |
| C0NGZ9 | Threonyl-tRNA synthetase | HCBG_02621 |
| C0NSB0 | Transfer RNA-Trp synthetase | HCBG_06040 |
| C0NL23 | tRNA (cytosine-5-)-methyltransferase NCL1 | HCBG_03853 |
| C0NUP2 | tRNA [guanine(37)-N1]-methyltransferase (EC 2.1.1.228) | TRM5 HCBG_06656 |
| C0NEY0 | tRNA guanylyltransferase | HCBG_01446 |
| C0NJJ2 | tRNA ligase (EC 6.5.1.3) | HCBG_03322 |
| C0NM44 | tRNA pseudouridine synthase | HCBG_04574 |
| C0NSG9 | Tyrosine-tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) | HCBG_06099 |
| C0NP46 | Uncharacterized protein | HCBG_04926 |
| C0NZF6 | Uncharacterized protein | HCBG_08536 |
| C0NIA9 | Uncharacterized protein | HCBG_03081 |
| C0NMF3 | Uncharacterized protein | HCBG_04683 |
| C0NPI9 | Uncharacterized protein | HCBG_05069 |
| C0NKI6 | Uncharacterized protein | HCBG_03666 |
| C0NF97 | Uncharacterized protein | HCBG_01563 |
| C0NEJ1 | Uncharacterized protein | HCBG_01307 |
| C0NEC3 | Uncharacterized protein | HCBG_01239 |
| C0NJN9 | Uncharacterized protein | HCBG_03369 |
| C0NYC3 | Uncharacterized protein | HCBG_07917 |
| C0NIB5 | Uncharacterized protein | HCBG_03087 |
| C0NYN4 | Uncharacterized protein | HCBG_08264 |
| C0NBT4 | Uncharacterized protein | HCBG_00580 |
| C0NKE4 | Uncharacterized protein | HCBG_03624 |
| C0NGB7 | Uncharacterized protein | HCBG_02389 |
| C0NM01 | Uncharacterized protein | HCBG_04531 |
| C0NG47 | Uncharacterized protein | HCBG_01863 |
| C0NEU7 | Uncharacterized protein | HCBG_01413 |
| C0NG27 | Valyl-tRNA synthetase | HCBG_01843 |
| C0P019 | Vip1 protein | HCBG_08749 |
| C0NG23 | Ribosome biogenesis protein RPF2 | HCBG_01839 |
| C0NGE8 | Ribosome biogenesis protein TSR3 | TSR3 HCBG_02420 |
| C0NAE4 | Ribosome biogenesis protein YTM1 | YTM1 HCBG_00090 |