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. 2019 Mar 27;11:54. doi: 10.1186/s13148-019-0651-z

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 6 — Methylation differences between tumor and normal samples for seven candidate genes. Notched boxplots show distribution of methylation beta values from 450 k methylation array for representative methylation probes within 500 bp surrounding the differentially methylated regions observed in candidate genes from our TET2 knockouts in matched tumor vs normal samples (n = 50). Notches indicate 95% confidence interval for medians. Significance for aggregated values determined by Mann-Whitney U test