Table 2. Pathway-Specific Genetic Polymorphisms for Allelic Risk Scores.
Allelic Variant by Pathway | Gene | Chromosome | Variation | Type | Direction of Model Coefficient |
---|---|---|---|---|---|
Endothelial function pathway | |||||
rs12944039 | NOS2A | 17 | A/G | Intron | + |
rs2072324 | NOS2A | 17 | A/C | Intron | + |
rs2255929 | NOS2A | 17 | A/T | Intron | + |
rs1137933 | NOS2A | 17 | C/T | Coding sequence nonsynonymous | − |
Metal-processing pathway | |||||
rs224572 | SLC11A2 | 12 | A/G | Intron | − |
rs422982 | SLC11A2 | 12 | A/T | Intron | + |
rs12227734 | SLC11A2 | 12 | A/G | Intron | − |
rs1005559 | SLC11A2 | 12 | A/T | Intron | − |
rs1799945 | HFE | 6 | C/G | Exon | − |
Oxidative stress pathway | |||||
rs1001179 | CAT | 11 | A/G | Promoter | + |
rs480575 | CAT | 11 | C/T | Intron | − |
rs2071746 | HMOX1 | 22 | A/T | Promoter | + |
rs5995098 | HMOX1 | 22 | C/G | Intron | + |
rs1800566 | NQO1 | 16 | C/T | Coding sequence nonsynonymous | + |
rs2282679 | GC | 4 | A/C | Intron | − |
rs3170633 | GCLM | 1 | A/G | 3′ End | − |
Abbreviations: +, positive; −, negative.