Table 2.
Information on the SNPs used in the algorithm
Chromosome number | Position | Overlapped gene | Representative trait of association | |
---|---|---|---|---|
rs3764261 | chr16 | 56959412 | CETP | Metabolic syndrome [13], triglyceride, HDL cholesterol levels [14] |
rs247617 | chr16 | 56956804 | CETP | Metabolic syndrome [15], HDL [16] |
rs2266788 | chr11 | 116789970 | APOA5 | Metabolic syndrome [13], triglyceride, HDL cholesterol levels [15] |
rs964184 | chr11 | 116778201 | ZPR1 | Metabolic syndrome [17], triglyceride, HDL cholesterol levels [18] |
rs10830963 | chr11 | 92975544 | MTNR1B | Obesity-related traits [19] |
rs1260326 | chr2 | 27508073 | GCKR | Metabolic traits [15] |
rs10830962 | chr11 | 92965261 | MTNR1B | Metabolic syndrome [15] |
rs1883025 | chr9 | 104902020 | ABCA1 | Metabolic syndrome [14], HDL cholesterol levels [24] |
rs1919128 | chr2 | 27578892 | C2orf16 | Metabolic syndrome [13] |
rs11757661 | chr6 | 88473861 | RNGTT | Adipose tissue [20] |
SNP, single nucleotide polymorphism; HDL, high-density lipopolysaccharide.