TABLE 3.
Panel of sequenced virus isolates
| Serotype | Strain | Genotype | GenBank no. | Contig size (bp)a |
|---|---|---|---|---|
| DENV-1 | BR/DB001/2003 | American-African | JF804014 | 1,667 |
| MX/DB006/2007 | American-African | JF804019 | 1,726 | |
| PH/DB007/2004 | South Pacific | JF804020 | 1,729 | |
| PR/DB008/1998 | American-African | JF804021 | 1,622 | |
| TH/DB047/2006 | Asian | JF812097 | 1,738 | |
| TI/DB011/2001 | South Pacific | JF804024 | 1,732 | |
| DENV-2 | BR/DB015/2006 | American-Asian | JF804028 | 1,529 |
| CI/DB016/2007 | American-Asian | JF804029 | 1,504 | |
| VN/DB014/1988 | Asian I | JF804027 | 1,499 | |
| DR/DB018/2003 | American-Asian | JF804031 | 1,521 | |
| CR/DB017/2003 | American-Asian | JF804030 | 1,503 | |
| IQT2133 | American | AY577439 | 1,525 | |
| 1349 | Cosmopolitan | EU056810 | 1,522 | |
| GU/DB019/2001 | Asian II | JF804032 | 1,529 | |
| IN/DB020/2006 | Cosmopolitan | JF804033 | 1,531 | |
| DENV-3 | BR/DB028/2003 | Indian | JF804041 | 1,780 |
| SA/DB028/1995 | South Pacific | JF804049 | 1,777 | |
| TH/DB055/2006 | Thailand | JF812105 | 1,777 | |
| EC/DB032/2000 | Indian | JF804045 | 1,775 | |
| CK/DB030/1991 | South Pacific | JF804043 | 1,772 | |
| DENV-4 | CI/DB039/2006 | Indonesian | JF804052 | 1,648 |
| MX/DB042/2006 | Indonesian | JF804055 | 1,647 | |
| SC/DB045/1994 | Indonesian | JF804058 | 1,666 | |
| EC/DB041/1999 | Indonesian | JF804054 | 1,616 | |
| TH/DB060/2006 | Southeast Asian | JF812110 | 1,625 |
a
Contig size was determined using SeqMan Pro (DNASTAR Lasergene 14).