TABLE 1.
Strain | Yr received | Location | CAMP factor | MLST typeb | PFGE cluster | 181-bp deletion | 522-bp deletion | 7-kb deletion | 49-kb deletion |
---|---|---|---|---|---|---|---|---|---|
15902 | 2018 | AK | + | ST-860 | A1 | + | |||
14141 | 2016 | LA (lab A) | + | ST-860 | A1 | + | |||
11133 | 2013 | ND | + | ST-860 | A1 | + | |||
15827 | 2018 | WI (lab C) | + | ST-860 | A1 | + | |||
14984 | 2017 | LA (lab B) | + | ST-860 | A2 | + | |||
14053 | 2015 | LA (lab A) | + | ST-860 | A3 | + | |||
14140 | 2016 | LA (lab A) | + | ST-860 | A3 | + | |||
15829 | 2018 | WY | + | ST-23 | B1 | + | |||
15830 | 2018 | WY | + | ST-23 | B2 | + | |||
11513 | 2014 | CO | + | ST-19 | E1 | + | |||
10072 | 2012 | IA | – | ST-22 | D1 | + | |||
10201 | 2012 | IA | – | Unknown* | D2 | + | |||
15844 | 2018 | KS | – | ST-19 | C1 | + | |||
15594 | 2017 | Ireland | – | ST-19 | C1 | + | |||
16396 | 2018 | MO | – | ST-19 | C1 | + | |||
14065 | 2015 | LA (lab A) | + | A1 | |||||
14313 | 2016 | LA (lab A) | + | A1 | |||||
14314 | 2016 | LA (lab A) | + | A1 | |||||
14327 | 2016 | LA (lab A) | + | A1 | |||||
14328 | 2016 | LA (lab A) | + | A1 | |||||
14330 | 2016 | LA (lab A) | + | A1 | |||||
14392 | 2016 | LA (lab A) | + | A1 | |||||
14312 | 2016 | LA (lab A) | + | A2 | |||||
14329 | 2016 | LA (lab A) | + | A2 | |||||
14331 | 2016 | LA (lab A) | + | A2 | |||||
14333 | 2016 | LA (lab A) | + | A2 | |||||
14391 | 2016 | LA (lab A) | + | A2 | |||||
14315 | 2016 | LA (lab A) | + | A4 | |||||
14326 | 2016 | LA (lab A) | + | A5 | |||||
14927 | 2017 | OH | + | B3 | |||||
14393 | 2016 | LA (lab A) | – | F1 |
+, Presence; –, absence. For the locations, U.S. state abbreviations are given where applicable. lab A, laboratory A.
Only 15 isolates were sequenced and typed using MLST. *, Unknown sequence type (ST) but very closely related to ST-22.