Table 1.
Ten most abundant oomycete and fungi OTUs found in 26 Quercus ilex dehesas of the Andalusian Network for Damage Monitoring in Forest Ecosystems, ordered by relative frequency (from core-features of each abundance matrix calculated among OTUs present in at least 50% of samples). Freq.: Number of sequences belonging at each OTU relative to the total number of sequences for the considered factor. % of samples: Percentage of samples in which the OTU was identified.
OTU ID | Taxon | Functional Guild | Location | Average Defoliation | Total (n = 52) | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Andevalo (n = 16) | S. Aracena (n = 10) | S. Norte (n = 12) | Pedroches (n = 14) | Low (C1) (n = 28) | High (C2) (n = 24) | ||||||||||||
Freq. (%) | % of samples | Freq. (%) | % of samples | Freq. (%) | % of samples | Freq. (%) | % of samples | Freq. (%) | % of samples | Freq. (%) | % of samples | Total Freq. (%) | % of Total samples | ||||
Oomycetes | OTU_1 | s__Phytophthora plurivora | Plant Pathogen | 11.1 | 100 | 17.5 | 100 | 19.7 | 100 | 7.1 | 100 | 20.9 | 100 | 7.7 | 100 | 15.2 | 100 |
OTU_6 | s__Pythium paroecandrum | Plant Pathogen | 6.0 | 63 | 21.4 | 80 | 0.5 | 58 | 0.4 | 71 | 11.0 | 75 | 11.4 | 63 | 7.8 | 67 | |
OTU_10 | s__Phytophthora psychrophila | Plant Pathogen | 1.1 | 69 | 5.8 | 40 | 11.5 | 75 | 1.8 | 57 | 7.1 | 67 | 2.7 | 50 | 6.0 | 62 | |
OTU_3 | s__Phytophthora quercina | Plant Pathogen | 5.5 | 100 | 2.7 | 90 | 6.1 | 75 | 4.0 | 86 | 6.0 | 92 | 2.4 | 81 | 4.7 | 89 | |
OTU_9 | s__Phytophthora citrophthora | Plant Pathogen | 1.5 | 69 | 2.9 | 50 | 6.7 | 75 | 0.4 | 100 | 5.2 | 89 | 0.5 | 50 | 3.5 | 75 | |
OTU_17 | s__Pythium heterothallicum | Plant Pathogen | 5.2 | 56 | 4.1 | 80 | 1.4 | 75 | 1.3 | 86 | 3.8 | 78 | 10.9 | 75 | 3.2 | 73 | |
OTU_15 | s__Pythium irregulare | Plant Pathogen | 8.7 | 81 | 1.7 | 50 | 0.7 | 83 | 0.1 | 64 | 2.7 | 69 | 9.5 | 81 | 3.0 | 71 | |
OTU_7 | s__Elongis-porangium undulatum | Plant Pathogen | 3.9 | 100 | 4.6 | 70 | 0.4 | 83 | 1.3 | 100 | 2.9 | 92 | 0.8 | 94 | 2.6 | 90 | |
OTU_4 | s__Phytophthora cinnamomi | Plant Pathogen | 2.0 | 56 | 1.9 | 30 | 2.1 | 50 | 3.5 | 64 | 2.1 | 58 | 31.8 | 38 | 2.2 | 52 | |
OTU_16 | g__Pythium sp. | Plant Pathogen | 1.4 | 75 | 3.2 | 30 | 1.4 | 67 | 0.1 | 57 | 2.0 | 64 | 0.4 | 50 | 1.7 | 60 | |
Total oomycete core biome frequency | 46.4 | 65.8 | 50.5 | 20.0 | 63.8 | 78.2 | 49.9 | ||||||||||
Fungi | OTU_3 | s__Mortierella elongata | Soil-Plant Saprotroph - Endophyte | 7.5 | 100 | 4.7 | 100 | 2.8 | 100 | 1.8 | 100 | 4.7 | 100 | 3.9 | 100 | 4.4 | 100 |
OTU_2 | g__Fusarium sp. | Plant Pathogen-Soil-Plant Saprotroph | 4.2 | 100 | 3.7 | 100 | 3.7 | 100 | 1.9 | 100 | 3.3 | 100 | 3.7 | 100 | 3.4 | 100 | |
OTU_8 | s__Russula praetervisa | Ectomy-corrhizal | 2.8 | 100 | 0.4 | 90 | 2.3 | 100 | 1.1 | 79 | 1.5 | 92 | 1.9 | 94 | 1.6 | 92 | |
OTU_11 | s__Mortierella elongata | Soil-Plant Saprotroph - Endophyte | 2.8 | 100 | 1.1 | 80 | 2.0 | 75 | 6.0 | 100 | 1.4 | 86 | 1.0 | 100 | 1.3 | 90 | |
OTU_24 | g__Solicoccozyma sp. | Unassigned | 1.0 | 100 | 0.9 | 100 | 0.8 | 100 | 1.7 | 100 | 1.1 | 100 | 1.1 | 100 | 1.1 | 100 | |
OTU_9 | g__Thelonectria sp. | Soil-Plant Saprotroph | 1.4 | 100 | 1.1 | 100 | 0.8 | 100 | 0.6 | 100 | 0.8 | 100 | 1.4 | 100 | 1.0 | 100 | |
OTU_25 | g__Penicillium sp. | Soil-Plant Saprotroph | 0.6 | 100 | 1.3 | 100 | 0.7 | 100 | 0.7 | 100 | 1.0 | 100 | 0.6 | 100 | 0.9 | 100 | |
OTU_51 | s__Trichoderma spp. | Soil-Plant Saprotroph | 0.6 | 100 | 1.1 | 100 | 0.5 | 92 | 0.7 | 100 | 0.8 | 100 | 0.7 | 94 | 0.7 | 98 | |
OTU_48 | s__Clonostachys rosea | Soil-Plant Saprotroph | 0.6 | 100 | 1.3 | 100 | 0.2 | 92 | 0.3 | 100 | 0.6 | 97 | 0.8 | 100 | 0.7 | 98 | |
OTU_15 | s__Trichoderma spp. | Soil-Plant Saprotroph | 1.1 | 94 | 0.2 | 100 | 1.2 | 92 | 0.5 | 93 | 0.9 | 92 | 0.3 | 100 | 0.7 | 94 | |
Total fungal core biome frequency | 22.6 | 15.8 | 15.0 | 15.3 | 16.0 | 15.2 | 15.8 |