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. 2019 Mar 29;9:5315. doi: 10.1038/s41598-019-41804-y

Table 1.

Ten most abundant oomycete and fungi OTUs found in 26 Quercus ilex dehesas of the Andalusian Network for Damage Monitoring in Forest Ecosystems, ordered by relative frequency (from core-features of each abundance matrix calculated among OTUs present in at least 50% of samples). Freq.: Number of sequences belonging at each OTU relative to the total number of sequences for the considered factor. % of samples: Percentage of samples in which the OTU was identified.

OTU ID Taxon Functional Guild Location Average Defoliation Total (n = 52)
Andevalo (n = 16) S. Aracena (n = 10) S. Norte (n = 12) Pedroches (n = 14) Low (C1) (n = 28) High (C2) (n = 24)
Freq. (%) % of samples Freq. (%) % of samples Freq. (%) % of samples Freq. (%) % of samples Freq. (%) % of samples Freq. (%) % of samples Total Freq. (%) % of Total samples
Oomycetes OTU_1 s__Phytophthora plurivora Plant Pathogen 11.1 100 17.5 100 19.7 100 7.1 100 20.9 100 7.7 100 15.2 100
OTU_6 s__Pythium paroecandrum Plant Pathogen 6.0 63 21.4 80 0.5 58 0.4 71 11.0 75 11.4 63 7.8 67
OTU_10 s__Phytophthora psychrophila Plant Pathogen 1.1 69 5.8 40 11.5 75 1.8 57 7.1 67 2.7 50 6.0 62
OTU_3 s__Phytophthora quercina Plant Pathogen 5.5 100 2.7 90 6.1 75 4.0 86 6.0 92 2.4 81 4.7 89
OTU_9 s__Phytophthora citrophthora Plant Pathogen 1.5 69 2.9 50 6.7 75 0.4 100 5.2 89 0.5 50 3.5 75
OTU_17 s__Pythium heterothallicum Plant Pathogen 5.2 56 4.1 80 1.4 75 1.3 86 3.8 78 10.9 75 3.2 73
OTU_15 s__Pythium irregulare Plant Pathogen 8.7 81 1.7 50 0.7 83 0.1 64 2.7 69 9.5 81 3.0 71
OTU_7 s__Elongis-porangium undulatum Plant Pathogen 3.9 100 4.6 70 0.4 83 1.3 100 2.9 92 0.8 94 2.6 90
OTU_4 s__Phytophthora cinnamomi Plant Pathogen 2.0 56 1.9 30 2.1 50 3.5 64 2.1 58 31.8 38 2.2 52
OTU_16 g__Pythium sp. Plant Pathogen 1.4 75 3.2 30 1.4 67 0.1 57 2.0 64 0.4 50 1.7 60
Total oomycete core biome frequency 46.4 65.8 50.5 20.0 63.8 78.2 49.9
Fungi OTU_3 s__Mortierella elongata Soil-Plant Saprotroph - Endophyte 7.5 100 4.7 100 2.8 100 1.8 100 4.7 100 3.9 100 4.4 100
OTU_2 g__Fusarium sp. Plant Pathogen-Soil-Plant Saprotroph 4.2 100 3.7 100 3.7 100 1.9 100 3.3 100 3.7 100 3.4 100
OTU_8 s__Russula praetervisa Ectomy-corrhizal 2.8 100 0.4 90 2.3 100 1.1 79 1.5 92 1.9 94 1.6 92
OTU_11 s__Mortierella elongata Soil-Plant Saprotroph - Endophyte 2.8 100 1.1 80 2.0 75 6.0 100 1.4 86 1.0 100 1.3 90
OTU_24 g__Solicoccozyma sp. Unassigned 1.0 100 0.9 100 0.8 100 1.7 100 1.1 100 1.1 100 1.1 100
OTU_9 g__Thelonectria sp. Soil-Plant Saprotroph 1.4 100 1.1 100 0.8 100 0.6 100 0.8 100 1.4 100 1.0 100
OTU_25 g__Penicillium sp. Soil-Plant Saprotroph 0.6 100 1.3 100 0.7 100 0.7 100 1.0 100 0.6 100 0.9 100
OTU_51 s__Trichoderma spp. Soil-Plant Saprotroph 0.6 100 1.1 100 0.5 92 0.7 100 0.8 100 0.7 94 0.7 98
OTU_48 s__Clonostachys rosea Soil-Plant Saprotroph 0.6 100 1.3 100 0.2 92 0.3 100 0.6 97 0.8 100 0.7 98
OTU_15 s__Trichoderma spp. Soil-Plant Saprotroph 1.1 94 0.2 100 1.2 92 0.5 93 0.9 92 0.3 100 0.7 94
Total fungal core biome frequency 22.6 15.8 15.0 15.3 16.0 15.2 15.8