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. 2019 Mar 29;20:55. doi: 10.1186/s12881-019-0788-9

Table 4.

Single variant test and cumulative allele odds ratio of RNF213 rare variants

Variant Ref Alt Case_Ref Case_Alt Control_Ref Control_Alt OR 95%CI p value*
Chr17:78247076–78,247,076 C 499 1 2430 0 0.171
Chr17:78298891 T C 499 1 2430 0 0.171
Chr17:78307986 G T 499 1 2430 0 0.171
Chr17:78311532 C T 498 2 2419 11 0.88 (0.20–4.00) 1.000
Chr17:78311620 A G 499 1 2430 0 0.171
Chr17:78313764 C T 494 6 2414 16 1.83 (0.71–4.71) 0.248
Chr17:78318465 C G 496 4 2403 27 0.72 (0.25–2.06) 0.383
Chr17:78319385 T G 494 6 2408 22 1.33 (0.54–3.30) 0.716
Chr17:78326772 C T 499 1 2429 1 4.87 (0.30–77.95) 0.312
Chr17:78350088 T C 489 11 2392 38 1.42 (0.72–2.79) 0.312
Chr17:78353469 T C 499 1 2430 0 0.171
Chr17:78354738 G A 499 1 2430 0 0.171
Chr17:78355494 C G 499 1 2429 1 4.87 (0.30–77.95) 0.312
Chr17:78356830 G T 499 1 2430 0 0.171
Chr17:78357541 A T 499 1 2430 0 0.171
Chr17:78360656 C T 499 1 2429 1 4.87 (0.30–77.95) 0.312
Chr17:78362497 C T 499 1 2430 0 0.171
Chr17:78363181 C T 499 1 2430 0 0.171
Total counts 8958 42 43,623 117 1.74 (1.23–2.49) 0.002

*P values were calculated using a two-sided Fisher’s exact test

Ref Reference allele(s), Alt Alternate allele(s)

Case = 250 ICASO patients, Control = 1KG Chinese Han population and GeneSky Database(including 1007 healthy individuals)