Table 3.
Primers Used for PCR Detection of Antimicrobial Resistance Genes
| Gene | Primers | Sequence (5′→3′) | Amplicon (bp) | References |
|---|---|---|---|---|
| β-lactams | ||||
| blaZ | blaZ-I | ACT TCA ACA CCT GCT GCT TTC | 173 | Martineau et al.32 |
| blaZ-II | TGA CCA CTT TTA TCA GCA ACC | |||
| Vancomycin | ||||
| vanA | vanA-I | TCT GCA ATA GAG ATA GCC GC | 377 | Klare et al.33 |
| vanA-II | GG AGT AGC TAT CCC AGC ATT | |||
| vanB | vanB-I | GCT CCG CAG CCT GCA TGG ACA | 529 | Fraimow et al.34 |
| vanB-II | ACG ATG CCG CCA TCC TCC TGA | |||
| vanC-1 | vanC-I | GAA AGA CAA CAG GAA GAC CGC | 796 | Clark et al.35 |
| vanC-II | ATC GCA TCA CAA GCA CCA ATC | |||
| Tetracycline | ||||
| tetK | tetK-I | TCG ATA GGA ACA GCA GTA | 169 | Ng et al.36 |
| tetK-II | CAG CAG ATC CTA CTC CTT | |||
| tetM | tetM-I | GTG GAC AAA GGT ACA ACG AG | 406 | |
| tetM-II | CGG TAA AGT TCG TCA CAC AC | |||
| tetO | tetO-I | AAC TTA GGC ATT CTG GCT CAC | 515 | |
| tetO-II | TCC CAC TGT TCC ATA TCG TCA | |||
| Erythromycin | ||||
| ermA | ermA-I | TCT AAA AAG CAT GTA AAA GAA | 645 | Sutcliffe et al.37 |
| ermA-II | CTT CGA TAG TTT ATT AAT ATT AGT | |||
| ermB | ermB-I | GAA AAG GTA CTC AAC CAA ATA | 639 | |
| ermB-II | AGT AAC GGT ACT TAA ATT GTT TAC | |||
| ermC | ermC-I | TCA AAA CAT AAT ATA GAT AAA | 642 | |
| ermC-II | GCT AAT ATT GTT TAA ATC GTC AAT | |||
| Aminoglycosides | ||||
| aac(6′)Ie-aph(2′′)Ia | aac_aph-I | GAG CAA TAA GGG CAT ACC AAA AAT C | 480 | Kao et al.38 |
| aac_aph-II | CCG TGC ATT TGT CTT AAA AAA CTG G | |||