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. 2019 Mar 27;7:e6610. doi: 10.7717/peerj.6610

Table 2. NCBI database blast of OTUs for selected families.

OTU Nearest neighbor1 Genbank acc. Nearest neighbor2 Genbank acc. Nearest neighbor3 Genbank acc.
475 Hyphomicrobium nitrativorans (100) NR_121713.1 Hyphomicrobium nitrativorans (100) NR_118448.1 Bosea lathyri (100) NR_108515.1
477 Bradyrhizobium lupini (100) NR_134836.1 Bradyrhizobium lupini (100) NR_044869.2 Rhodopseudomonas palustris (100) NR_103926.1
484 Bosea robiniae (100) NR_108516.1 Bradyrhizobium lupini (99) NR_134836.1 Bradyrhizobium ottawaense (99) NR_133988.1
502 Bradyrhizobium daqingense (100) NR_118648.1 Bradyrhizobium lablabi (100) NR_117513.1 Beijerinckia doebereinerae (100) NR_116304.1
88 Rhizobium rhizoryzae (100) NR_133844.1 Rhizobium flavum (100) NR_133843.1 Rhizobium azibense (100) NR_133841.1
115 Rhizobium rhizoryzae (100) NR_133844.1 Rhizobium flavum (100) NR_133843.1 Rhizobium azibense (100) NR_133841.1
143 Rhizobium rhizoryzae (100) NR_133844.1 Rhizobium flavum (100) NR_133843.1 Rhizobium azibense (100) NR_133841.1
233 Rhizobium paranaense (100) NR_134152.1 Rhizobium rhizoryzae (100) NR_133844.1 Rhizobium flavum (100) NR_133843.1
555 Variovorax guangxiensis (100) NR_134828.1 Variovorax paradoxus (100) NR_074654.1 Variovorax boronicumulans (100) NR_114214.1
566 Hydrogenophaga flava (100) NR_114133.1 Hydrogenophaga bisanensis (100) NR_044268.1 Hydrogenophaga defluvii (100) NR_029024.1
567 Hydrogenophaga flava (100) NR_114133.1 Hydrogenophaga bisanensis (100) NR_044268.1 Hydrogenophaga defluvii (100) NR_029024.1
333 Sphingomonas gei (100) NR_134812.1 Sphingomonas ginsengisoli (100) NR_132664.1 Porphyrobacter colymbi (100) NR_114328.1
539 Uncultured bacterium (100) KY606782.1 Methyloversatilis discipulorum (71) KY284088.1 Methyloversatilis discipulorum (71) KY284080.1
63 Thioclava sp. (100) CP019437.1 Rhodobacter sp. (100) KY608089.1 Uncultured Rhodobacter sp. (100) KY606875.1
819 Dyadobacter jiangsuensis (100) NR_134721.1 Dyadobacter fermentans (100) NR_074368.1 Dyadobacter tibetensis (88) NR_109648.1
832 Dyadobacter jiangsuensis (100) NR_134721.1 Dyadobacter fermentans (100) NR_074368.1 Dyadobacter tibetensis (88) NR_109648.1
415 Uncultured bacterium (100) KT769749.1 Uncultured bacterium (91) KT724695.1 Uncultured Planctomyces sp. (87) JX576019.1
45 Frigidibacter albus (100) NR_134731.1 Paracoccus sediminis (96) NR_134122.1 Nioella nitratireducens (94) NR_134776.1
69 Frigidibacter albus (100) NR_134731.1 Paracoccus sediminis (100) NR_134122.1 Nioella nitratireducens (97) NR_134776.1
302 Sphingorhabdus arenilitoris (100) NR_134184.1 Sphingopyxis italica (100) NR_108877.1 Parasphingopyxis lamellibrachiae (100) NR_113006.1
310 Sphingomonas yantingensis (100) NR_133866.1 Sphingomonas canadensis (100) NR_108892.1 Blastomonas natatoria (100) NR_113794.1
355 Blastomonas natatoria (100) NR_113794.1 Sphingomonas ursincola (100 NR_040825.1 Blastomonas natatoria (100) NR_040824.1

Note:

Closest first three neighbors with highest identity match and with a minimum of 85% coverage for each OTU. NCBI blast on the February 11, 2016, except the OTU 662 which the blast search from August 30, 2016 and OTU 63 and 415 on February 2017.