Table 2. Comparison of run times for three simulation setups with different nonbonded force treatment: single-range scheme (SR) and twin-range scheme with constant-force application (TR CFA) using a Nosé-Hoover (NH) thermostat.
All systems were simulated for 0.4 ns on 1 CPU with 4 cores. A time step of 2 fs was used. The pairlist was generated using the standard charge-group based algorithm of the GROMOS program. The simulated system consists of 2002 chloroform and 8129 water molecules.
Force splitting | n m | n p | Run time [h] |
---|---|---|---|
TR CFA | 5 | 5 | 6.1 |
SR | 1 | 5 | 11.4 |
SR | 1 | 20 | 8.8 |